Hemiscyllium ocellatum (epaulette shark): 132835000
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Entry
132835000 CDS
T09720
Symbol
polr3a
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1 isoform X1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc03020
RNA polymerase
hoc04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
132835000 (polr3a)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
132835000 (polr3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hoc03021
]
132835000 (polr3a)
Enzymes [BR:
hoc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
132835000 (polr3a)
Transcription machinery [BR:
hoc03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
132835000 (polr3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
132835000
NCBI-ProteinID:
XP_060710207
LinkDB
All DBs
Position
43:25995913..26046392
Genome browser
AA seq
1402 aa
AA seq
DB search
MGKEQFRETDVAKKISHICFGMKSAEQMRQQAHIQVVSKNLYSQDNSHTPLTHGVLDHRM
GTSEKDRPCETCGKNLADCIGHYGYIDLELPCFHVGYFKAIIGILQMICKVCSHILLSQE
EKKLFLDTLKRPGLTYLQKRGLKKKVSEKCRKRTFCLYCGSFNGPVKKCGLLKIIHEKYK
TNKKVMDPVVSDFLQSFDIAIEHNKEVEALLGRAQENLNPLVVLNMFKRIPSEDIPLLLM
NLEAGKPADLVLTRLLVPPLCIRPSVVSDLKSGTNEDDLTMKLTEIIFLNDVIKKHRMSG
AKTQMIMEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKR
VDFSSRTVISPDPNLRIDEVAVPVHVAKILTYPERVTKANLEFMRKLVRNGPEVHPGANF
IQQRHTNLKRFLRYGNREKMAQELKYGDIVERHLIDGDVVLFNRQPSLHKLSIMAHIAKV
KPHRTFRFNECVCTPYNADFDGDEMNLHLPQTEEAKAEALVLMGTKANLVTPRNGEPLIA
AIQDFLTGAYLLTRKDTFFDRAKACQIVASILSGKDERIKISLPPPAILKPVTLWTGKQI
FSLILKPSKDCPIKANLRTKGKQYCGKGEDLCYNDSFVVIQNSELMSGSLDKGTLGSGSK
NNIFYILLRDWGQMAAADAMSRLARLAPVYLSNRGFSIGIGDVTPGKGLLKAKQELLDAG
YKKCDEFIEALNTGKLQQQPGCTAEETLEALILKELSVIRDHAGSACLRELDKSNSPLIM
ALCGSKGSFINISQMIACVGQQAISGSRVPDGFENRSLPHFEKHSKLPAAKGFVADSFYS
GLTPTEFIFHTMAGREGLVDTAVKTAETGYMQRRLVKSLEDLCTQYDLTVRSSTGDVIQF
IYGGDGLDPAAMEGKDEPLEFKRVLDNIRAIYPCHSEPALSKNEVIAAAEAIMKRSEFLC
CQNEYLQALTGTDCEKYIEAIKNFIKDFSEKIKKTRDKYGINDNGTTEPRVLYQLNRITP
TQVDKFLETCRDKYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASMNITLGVP
RIKEIINASKSISTPIITAHLDQDDDADFARLVKGRIEKTLLGEISEYIEEVFLPDDCFI
LVKLSLERIRLLRLEVNAETVKYSICTSKLRVKPGDVAVHGEAVVCVTPRENSKSSMYYV
LQYLKEELPKIVVQGIPEVSRAVIHIDEQGGKEKYKLLVEGDNLRAVMATHGVKGTHTTS
NNTYEVEKTLGIEGARSTIIHEIQYTMKNHGMSIDRRHVMLLSDLMTYKGEVLGITRFGL
AKMKESVLMLASFEKTADHLFDAAYFGQKDSVCGVSECIIMGIPMNIGTGLFKLLHKADK
DPDPPKRPLMFDNNEFHIPIVT
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atggggaaggaacagttcagggagacggatgtggctaagaaaataagtcacatatgtttt
gggatgaagtctgcagagcagatgaggcagcaagcgcatatccaagtggtcagcaagaac
ctgtatagtcaagataacagtcatactcctttgacccatggtgtactagatcatcgcatg
ggaaccagtgagaaggatcgtccatgtgaaacatgtgggaagaatctggctgattgcatt
ggacattatggatacattgacttggagctgccatgtttccatgttggttattttaaagct
attattggcatcttgcagatgatctgtaaagtatgctctcatatcctgctgtctcaagaa
gaaaagaagctgtttctcgatactttaaaaagacctggtttaacctatcttcagaaacga
ggcctaaagaaaaaagtttctgagaaatgcaggaaaaggaccttttgtctatattgtgga
tccttcaatggtcctgtgaaaaaatgcggcttattgaaaattattcatgaaaaatacaag
acaaataagaaagtgatggatcctgtggtatcagattttctacagtcttttgatattgcc
atagaacacaacaaagaagtggaggcgttgcttggaagagctcaggagaatctaaatcct
cttgtggtgttaaatatgtttaaaaggattccctcagaagacatcccactgctgcttatg
aacctggaagcaggaaaacctgcagacctagtccttactcgattactcgttcctccactt
tgtatcagaccttcagtggtcagtgaccttaaatcgggaactaatgaggatgacttaaca
atgaagctgacagaaatcatcttcttaaacgatgtaattaaaaagcatcgaatgtctgga
gcaaaaactcaaatgatcatggaagattgggatttcctacaattacagtgtgcgctttac
attaatagtgaactttctggaattcctctcaacatggcacccaagaagtggaccaggggg
tttgtacaaaggctgaaaggaaaacaaggtcgatttcgaggaaacttgtctggtaaaaga
gtggatttttctagcagaactgtaatctctcctgatcctaacttgcgtatagatgaagta
gcagttccagtacatgtggcaaagatcctgacatatcctgaaagggtaacaaaagctaac
ctggaattcatgcggaagcttgtacgtaatggacctgaagtacatccaggggctaatttc
attcaacagcgacacacaaatctgaagagatttctaagatatggaaatagggagaaaatg
gcacaggaactgaaatacggtgatattgtggagcgacatctaattgatggagatgtagtg
ctattcaatagacaaccgtccctgcacaaactgagcatcatggcccatatagccaaggtg
aaaccccacagaacatttcggttcaatgaatgtgtctgcacaccttataatgcagatttt
gatggtgatgaaatgaatcttcatcttcctcaaactgaggaggccaaggctgaagcactg
gttctaatggggacaaaagccaatttggtaactcctagaaatggggaacctctaattgct
gcaatccaggactttctaacaggtgcctatctgcttaccaggaaggacactttctttgac
cgagcaaaagcatgtcagattgttgcctccattctttcaggcaaagacgagcgaatcaaa
attagtcttccacctcctgcaatcttaaagcctgtgacattgtggacagggaagcaaatt
tttagcctcattcttaagccaagcaaggactgtcctattaaagcaaacctgcgtaccaag
ggcaagcagtactgtggaaaaggtgaagacctctgttacaatgactccttcgttgtaatc
cagaacagtgagctgatgtctgggagcttggataaaggaactctgggatcaggttccaaa
aacaacatcttctacatcctgctgagagactggggacagatggcggctgcagacgctatg
tctcgtcttgctcgcctggctcctgtttatctgtccaatcgagggttttctattggcatt
ggcgatgtaacaccaggtaaggggctgctaaaagccaaacaggaactactggatgctggc
tacaagaagtgtgatgaattcattgaagcactcaacacaggcaaacttcaacaacaacct
ggatgcacagcagaagaaacattagaagccttgatccttaaggagctgtctgtgattaga
gaccatgctggcagtgcttgccttagggagctagacaagagtaacagcccccttattatg
gccctctgtggttcaaaaggatccttcatcaacatctcccagatgattgcctgtgtagga
cagcaggccattagtggatcccgtgttcctgatggttttgagaacagatctttgcctcac
tttgaaaaacattctaagcttccagcagcaaaggggtttgtagcagacagtttctattct
ggtttaactccaacagaattcatcttccataccatggctggtcgtgagggcctagtggat
actgctgtaaaaacagcagaaactgggtacatgcagagacgtctggttaaatctttagag
gatctttgcacacagtatgatttaactgttcgcagctcaactggtgatgtcatccagttt
atctatggtggcgatggcttagatccagcggctatggaaggcaaagatgaacctttagaa
tttaagagggttctggataatattcgggccatttacccatgtcacagtgaacctgctttg
agtaagaatgaagtgattgcagctgcagaggcaattatgaagagaagcgaatttctttgt
tgtcaaaatgaatatctgcaggctctaactgggactgattgtgagaaatacattgaggca
atcaaaaattttatcaaggatttttccgagaagatcaagaaaactagagacaaatatggg
attaatgacaatggaactactgagccccgtgttttataccagttgaaccgaataactcct
acacaagtagacaaatttctagaaacctgtagagacaagtacatgagagctcagatggag
ccaggttctgctgttggtgctttgtgtgcacaaagtataggagaaccaggcacacagatg
accttgaagactttccattttgctggtgtagcttcaatgaacattactctgggtgtaccc
agaataaaagaaattattaatgcatcaaaatctataagtactccaattattacagcacat
cttgaccaagatgatgatgctgacttcgctcgactggtaaaaggaagaattgaaaagact
ctgctcggagaaatttcagaatatattgaagaagtttttctgcccgatgactgcttcatt
cttgtcaagctttccctagaaagaatccgacttctgagactagaggtgaacgcggaaact
gtgaaatactctatttgcacatcaaaactgcgagtcaaaccaggtgacgttgcagttcat
ggtgaagctgtggtgtgtgtcacacctcgagagaatagcaaaagttcgatgtactacgtt
cttcagtatctaaaagaagaactgccaaagattgttgtccaaggtattccagaagtctcc
agagcagttattcatattgatgagcaaggtggaaaggagaagtacaaactactggtggaa
ggtgacaacttgcgtgcagtcatggcaactcatggtgtcaaaggaacacatacaacatca
aacaacacttacgaggtagagaagacattgggtattgaaggtgctcgatccactatcatc
catgagatccaatatacaatgaaaaatcacgggatgagcattgacagaagacatgttatg
cttttgtcagacctaatgacatacaagggcgaagtattgggaataacccggtttggcttg
gcaaaaatgaaagaaagtgtcctcatgttggcctcatttgagaaaactgcagatcatctc
tttgatgctgcatactttggacagaaggactcagtctgtggtgtgtcagagtgtattatt
atgggaatcccaatgaacatagggacaggacttttcaaacttcttcacaaagctgacaag
gacccagacccaccgaagaggccactgatgtttgacaataatgaatttcatatcccaatt
gttacgtag
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integrated database retrieval system
