Hemiscyllium ocellatum (epaulette shark): 132835024
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Entry
132835024 CDS
T09720
Symbol
ercc6
Name
(RefSeq) DNA excision repair protein ERCC-6
KO
K10841
DNA excision repair protein ERCC-6
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
132835024 (ercc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hoc03036
]
132835024 (ercc6)
03400 DNA repair and recombination proteins [BR:
hoc03400
]
132835024 (ercc6)
Chromosome and associated proteins [BR:
hoc03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
132835024 (ercc6)
DNA repair and recombination proteins [BR:
hoc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
132835024 (ercc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
DEAD
Spt5-NGN
AAA_14
Motif
Other DBs
NCBI-GeneID:
132835024
NCBI-ProteinID:
XP_060710254
LinkDB
All DBs
Position
43:complement(17585246..17642197)
Genome browser
AA seq
1498 aa
AA seq
DB search
MPTAGVPAADDSAGCHRPGVAESEALFISEAPQTLQDNGLLASYLDAPADCDISDSRPST
STAFQPADRRSTQKRVQIDRQQIQAVDQGAQALELQGLGVDVYDQDVLEQGVLQQVDRAI
SEASQAAKRADAEKEYCSVLDDLRSTTICLKQTSKIIEQLTPHAAANKEVRRKLESVKRQ
KDNKERQLKKIRAKQKHLQAVLSGADIQKLEAEYESCDEEPGPSSLGSMLMPAQETEWEH
LIRTGQMTPFGTKIPQKETKKEPRKIMLNDASDFEKYLADQAKMAAIRRKSFTKRAKRRK
TAASVQAETEASGGKTQNPEGGPKKNSTVSRTDRKLKKHLRKLQRKTLEIKFKAGAPTKK
NSLQELVGGREDRGSDSEASLNVPDEELLYPDEFGNSDDEVSDNGTFKRAPKKRQKQSHS
EEAFSPSSGEDESRRRIKAHKDDGNEELYRKRLRKWKRKRLLEKAEQQAHGEGAESDESD
AEFDEGFKVPGFFWRKLYKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAFLAGLS
YSKIRTRGSNYRYEGLGPVVIVCPATVMHQWVKEFHTWWPPFRVAVLHETGSFTSRKERL
IREIAACNGILITSYSYVRIMQESIAHYNWHYVILDEGHKIRNPNAAITVACKQFRTPHR
IILSGSPMQNNLKELWSLFDFIFPGKLGTLQVFMEQFSVPITMGGYQNASPVQVQTAYKC
ACVLRDTINPYLLRRIKADVKMNLALPDKNEQVLFCRLTEEQREVYQNFIDSKEVYQILN
REMQVFSGLIALRKICNHPDLFSGGPKILKGVPDEQLTEEEHFGYWKRSGKMIVVDALLK
LWYKQGHRVLLFSQSRQMLDILEVFIRNLGYSYLKMDGTTSVGSRQTLISRYNENSSIFV
FLLTTRVGGLGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKKQVTIYRLLTAGSIE
EKIYHRQIFKQFLTNRVLKDPKQRRFFKSNDLTELFTLSSPDGTQGTETSAIFAGTGSDV
YAPTRKKTGKSSSSFRKRNVMLSDQDSSKQVELPPDFSLQCNSDKSQSGKLSVNPQKELK
ENSVFGSAGTVTQVKQEIKSAEFPTVSLSEHRRLDQPTNSAHKETDNNNVESALSNKAGL
LDHGHTPGQIILNEERKDCTQNSKKLQNISSTDLEETGNSHELHHKHQSKTKHQITKSEH
SDALSVYKHKHKKHKRHKDAYFEGERIPHLVKRQKIKKRDHEEEQKEKEVCRQSDDYVLE
KLFKKSGIHSVMKHDVIMESSNPDYVLVEAEANRVAQEALKALKASRQRCLGVSSGVPSR
INSSQLSGTAAAVKPRFGQKKNPLLPTSSPSSKSTPEKCKDAAVIEKDEAAKSHFSGVPS
EEEAGRVLPSSSSLLAKMRARNHLTLSQSLEIDESSEPAAVPPPVPTEHDELLVEMRNFI
AFQASTDGQATTTELLQEFQSKLSPAQTAVFRELLRNLCTFHRNASGDGIWTLKLEFR
NT seq
4497 nt
NT seq
+upstream
nt +downstream
nt
atgccgaccgcaggagttcctgcagctgatgattcagcaggttgccacagaccaggtgtg
gctgagtctgaagctctcttcatttcagaggctccccagactcttcaagataatggactc
ttggctagttatctggatgctcctgctgactgtgacatctcggatagcaggccatccacc
tccactgccttccagcctgccgacagaaggagcactcagaaaagggtccagattgatcgg
cagcagatccaagccgtggaccagggtgcccaggctctggagctgcaaggtctcggagtc
gatgtctacgaccaggacgtattggagcagggagttctccagcaagtggacagagcgatt
agtgaagccagtcaagctgccaaaagagcagatgcagagaaagagtactgttctgtttta
gatgatctgaggtccaccaccatctgtctgaagcagacaagtaagatcattgagcagttg
actcctcatgctgctgcaaacaaggaagtaaggagaaagctggagtctgtgaaaaggcag
aaggataacaaggaaagacagttgaaaaagataagggccaaacagaaacacctccaggca
gtgctcagtggtgctgacattcagaagcttgaagctgaatacgaatcgtgtgatgaagaa
ccaggtccttcgtcgttaggaagtatgttaatgccggcacaggaaaccgaatgggagcat
ctcatccgcaccggacagatgacaccctttggcacgaaaatacctcagaaagaaacaaaa
aaggagcctcgcaagatcatgttgaatgatgcatcagactttgagaagtatctggccgat
caggcaaagatggctgcgattcggaggaagtccttcacaaaaagagccaagaggagaaaa
acagcagcttctgtgcaggccgaaactgaggcatcaggtggcaaaactcaaaatccagaa
ggtggccccaagaaaaatagcactgtgtcaagaacagaccgcaaactgaaaaagcatttg
cggaaactgcagcgcaagaccctcgagattaaatttaaagctggagctccaaccaagaag
aactccctgcaagagttggtgggagggcgagaagacagaggctcagacagtgaagcgtcg
ctcaatgttcctgatgaggagttactttatccagatgaatttggtaacagcgatgatgaa
gtgtccgataatggcacatttaagagagcaccaaagaaaaggcaaaagcagagtcactcg
gaggaagctttctcaccaagctcaggtgaagatgaatcgagacgcagaataaaagcacac
aaggatgatggaaatgaagagctgtacaggaaaagattgaggaagtggaaaaggaagagg
ctgctggaaaaggcagagcagcaagctcatggcgaaggtgcagagtctgacgaaagcgat
gccgaatttgatgaggggttcaaggtgcctggcttcttttggagaaagctatacaagtat
cagcagacaggtgttcgttggctttgggaattacactgccaacaggcaggaggaattttg
ggggatgaaatgggactgggcaagaccatccagataattgccttcttggcaggcctgagc
tacagcaagataaggacacgaggctcaaattacagatatgagggcttgggtcctgtggtc
attgtttgcccagcgacagtgatgcaccagtgggtgaaagaattccacacatggtggcca
ccattcagagtagcagtcctgcatgagacgggttccttcaccagcaggaaggagaggctc
attcgagaaattgcggcatgtaatggtattctgatcacctcatattcctacgtccgaatt
atgcaggagtcgattgcacactataactggcattatgtaattttagatgaagggcacaag
atacgaaatccaaacgctgcaattactgtcgcatgtaaacagtttcgcactccacatcgc
attattctgtctggttcgccgatgcagaataacttgaaggagctctggtctttatttgac
ttcatttttccaggaaagctaggaacgttgcaagtcttcatggaacaattttctgtccct
atcacaatgggaggctaccaaaacgcctcacctgttcaggtgcaaactgcctataagtgt
gcttgtgttttacgggacaccataaatccatacttgttgcgacgaattaaagccgatgta
aaaatgaatctggcattgccagacaagaatgaacaggtgctattttgtcgcttaacagaa
gaacaacgtgaagtctaccaaaactttatagattccaaggaagtctatcagattctcaac
agagaaatgcaggtattctctggcctgatagctctcagaaagatctgtaatcaccccgac
ctgttttctggtggccccaagattctgaagggggtgcctgatgagcagctgacagaagaa
gagcactttgggtattggaaacgatctggaaagatgattgtagtcgatgcgttgctaaag
ctgtggtacaaacaaggacatcgagtacttcttttctctcaatcccgacagatgttggac
atcttggaggtgttcatacggaatctgggctattcatatcttaaaatggatggaacaact
tcagtaggttctagacagacactcatttctagatacaatgagaattcctcaatatttgtc
ttcctcctcacaactagagttggtggtttgggagtaaacttgacaggagcaaaccgagtt
attatctacgaccctgactggaacccgagtactgacacacaggcccgagagcgtgcttgg
aggataggtcaaaagaaacaggttactatttacaggttactaacagctggatcaattgaa
gaaaaaatctaccaccggcaaattttcaagcagttcctgactaatcgagtattgaaggac
ccaaagcagagacggtttttcaaatctaatgatcttacagagcttttcacgttaagcagt
ccagatggtactcagggaacagaaacaagtgcaatttttgcaggcacaggttcggatgtt
tacgctcctaccagaaaaaaaactgggaaaagctccagttcattcaggaagagaaatgtc
atgctatcagatcaggattccagcaagcaagtcgagttaccaccggatttctctctccag
tgcaattcagacaaaagtcagtcaggaaaactttctgttaacccacagaaggaattaaaa
gagaatagtgtttttggcagtgctggaactgtcactcaagtaaaacaagaaataaaaagt
gctgaatttccaactgtttcactgtctgaacatcgaaggcttgatcaaccaaccaattct
gcacataaggaaactgacaacaataacgtagaatctgcactcagcaataaagctggacta
cttgaccatggtcacacaccgggacaaatcattctaaacgaggaaaggaaagactgcact
cagaattcaaaaaaactgcaaaatataagtagtactgacttagaagaaactggcaacagc
catgaacttcaccataaacaccaatctaaaacaaaacatcaaataactaagagtgagcac
agtgatgctctttcagtgtacaagcacaaacacaaaaaacacaaacgccacaaagatgca
tattttgaaggcgagcgtatcccccacttggtaaaaaggcagaaaatcaaaaagagggat
catgaggaagagcagaaagaaaaggaagtctgcaggcagagtgatgattacgtcttggaa
aagctgttcaaaaaatctggaatccacagtgtgatgaagcatgatgttattatggagtca
tccaatcctgattatgtattagttgaagcagaagctaatcgagttgctcaggaggctttg
aaagcattgaaggcttcgagacagcgttgcctgggtgtctcttctggtgtgccatccagg
atcaatagcagtcagctgtcaggaacagcagctgctgtaaagccaagatttggtcagaag
aaaaatcccctgcttccaactagcagtccttcttccaaatccactccagaaaaatgcaag
gatgctgctgtaattgaaaaggacgaagctgccaaatctcacttcagtggtgttccatca
gaagaagaggcaggccgtgtgctcccgtcctcttcctcgttactggccaaaatgcgagca
aggaatcatttgactttgtctcaaagccttgaaattgatgagagctctgagcctgcagca
gtgcccccgcctgtaccaaccgagcacgatgagctattggtggaaatgaggaacttcatt
gcattccaggctagcacggatgggcaagccacaactactgagttgttacaagagtttcag
tccaagttatcacctgcacagacagctgttttccgagaacttcttagaaacttgtgcact
ttccacagaaacgcatctggggatgggatctggacactgaaactagaattccgatga
DBGET
integrated database retrieval system
