Hemiscyllium ocellatum (epaulette shark): 132835816
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Entry
132835816 CDS
T09720
Symbol
colgalt1a
Name
(RefSeq) procollagen galactosyltransferase 1 isoform X1
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc00310
Lysine degradation
hoc00514
Other types of O-glycan biosynthesis
hoc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
132835816 (colgalt1a)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
132835816 (colgalt1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
hoc01003
]
132835816 (colgalt1a)
Enzymes [BR:
hoc01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
132835816 (colgalt1a)
Glycosyltransferases [BR:
hoc01003
]
O-Glycan biosynthesis
O-linked Gal type
132835816 (colgalt1a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Motif
Other DBs
NCBI-GeneID:
132835816
NCBI-ProteinID:
XP_060710887
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Position
45:21623476..21686335
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AA seq
620 aa
AA seq
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MVSRGVSLRVPRRLRASWLLLAAVIVALGGPGSGYFPEERWAEESPLLRPRVQITIIARN
SAHGLPAFLGRVEGLSYPKDRLCLWVATDHNVDNTTAILREWLVNVQGLYHSVEWRPMDE
PKSYFDEMGPKHWSDSRYEHVMKLRQAALNSARDRWADYILFLDADNFLINPDTLNHLIA
ENKTVVAPMLDSRSAYSNFWCGMTAEGYYKRTPAYVPIRKRDRLGCFPVVMVHSTMLIDL
RKEASKQLAFYPPHPDYTWSFDDIIVFAFSCRQAEVQMYICNKEHYGFLQVPLKLTSTMQ
DEMDSFTHVHLEIMVNHPPMEPSKYLSVAPKYPNKMGFDEIFLINLKRRPDRRMRMLNSL
HEQEIACKVIDAVDGRAFNSTQIKALGINMMPNYEDPYSGRPLTKGEMGCFLSHYNVWKE
IVDRGLQTSMVIEDDLRFEIFFKRRLKYLMKEVENVALDWDLIYIGRKRMQVDHPEKSVP
GVRNLVEADYSYWTLGYVLSLQGAQKLIDAKPFTKMLPVDEFLPVMYNKHPVSEYMDHFE
NRNLRAFSAEPLLIYPTHYTGDPGYVSDTETSTVWDNEKLKTDWDRAKSQKTKEQAKIRE
AAQNLDMSHSPIDSASRDEL
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atggtttcccgtggtgtttctctccgtgtcccccgccgccttcgggcctcttggctgttg
ctggccgctgttatcgttgccctgggcggcccgggatccggatatttcccggaggagcgt
tgggctgaggagtccccgctgctccggccccgggtccagatcaccatcatcgcccggaac
agcgcacacggactgcccgcttttcttggccgcgtcgaggggctctcctaccccaaggac
aggctgtgtctctgggtagcgacagaccacaatgtggataacaccacggctatactaagg
gagtggctggtgaatgtacagggactttaccattctgtcgaatggcgacctatggatgag
ccaaaatcctactttgatgaaatggggcctaagcattggtctgactcccgctatgagcat
gtgatgaagctgaggcaagcagcactgaactcagccagggatcgatgggctgattatatt
ttgtttctcgatgcagacaacttcctgatcaatcctgacaccttaaaccatctcatagcg
gagaacaaaacagttgtggcacccatgttggactcacgctctgcatattccaatttctgg
tgtggaatgactgctgagggttattacaagcggaccccagcctacgtgcccatacggaag
cgggaccgactgggctgcttcccggttgtcatggtgcactccacaatgctgatcgacctc
cgtaaagaggcctccaagcaactggcgttttaccctccacacccagattacacctggtct
ttcgacgacatcattgtctttgctttctcatgccgacaagcagaggtccagatgtatatc
tgtaataaggaacattatgggttcctgcaggtgccactgaagttgaccagcaccatgcag
gatgagatggatagcttcactcatgtccatttggagattatggtgaaccaccctcccatg
gagccttccaaatacttgtctgtggcaccaaagtaccccaataagatgggtttcgatgag
atttttctgatcaacttgaaacgccgtccagataggagaatgcgaatgcttaattcgctg
catgagcaggagattgcatgcaaagtaattgatgctgttgatggaagggccttcaacagc
acccagataaaggcgcttggtatcaatatgatgccaaattatgaagatccttactcgggc
cggcctttgaccaagggggagatgggctgttttctcagtcactacaatgtctggaaagag
attgttgaccgaggattgcagacctctatggtcattgaagatgatctacggttcgagatc
ttcttcaagcggagactgaaatatttgatgaaggaagtggagaatgtagcactcgactgg
gatctgatctacattggccgaaagcggatgcaagtggatcacccagaaaagtcagtgcct
ggggtccggaatttggttgaggctgattactcctattggactctcggatatgtcctctca
ctccaaggggcacagaagctcattgatgccaagccattcaccaagatgttacctgtggat
gaatttctgcccgtgatgtataacaagcacccagtgtctgagtacatggatcactttgag
aaccgtaacctgagggctttctctgcggaaccactcctcatatacccgacgcattacaca
ggtgacccaggctacgtgagcgacacagagacctccactgtctgggacaacgagaagctg
aagacggactgggaccgtgccaagtcacagaagaccaaggaacaggcaaaaatccgggaa
gcagcacagaatctggacatgtcacattctcccattgactccgcctccagagatgaactg
tga
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