Hemiscyllium ocellatum (epaulette shark): 132836038
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Entry
132836038 CDS
T09720
Symbol
smarca4a
Name
(RefSeq) SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4a isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
132836038 (smarca4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hoc03021
]
132836038 (smarca4a)
03036 Chromosome and associated proteins [BR:
hoc03036
]
132836038 (smarca4a)
Transcription machinery [BR:
hoc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
132836038 (smarca4a)
Chromosome and associated proteins [BR:
hoc03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
132836038 (smarca4a)
Chromatin remodeling factors
BAF complex
132836038 (smarca4a)
PBAF complex
132836038 (smarca4a)
GBAF(ncBAF) complex
132836038 (smarca4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
HSA
Bromodomain
BRK
QLQ
ResIII
HDA2-3
DEAD
DUF2009
Motif
Other DBs
NCBI-GeneID:
132836038
NCBI-ProteinID:
XP_060711236
LinkDB
All DBs
Position
45:complement(13321572..13426789)
Genome browser
AA seq
1637 aa
AA seq
DB search
MSTPDPPMGGTPRPGPSPGPGPSPGSMLGPSPGPSPGSAHSMMGPSPGPPSASHSMTPQG
PGGYAAESIHQLHKAMESMHEKVMPDDPRYSQMKSISMRSGGHSGMAPPPSPMDQHSQGY
PSPLGCTEHAPSPVPANGPPSVPPMSSGLGGVPMDGGEPQTLGQQNRGPSPFNQGQLHQL
RAQIMAYKMLARGQPIPDHLQLAIQGKRPPPGMQQQISSLPPPSTPGTGVASGPAPGNYN
RPLGMGGSNMMPPGSAGVNQGMQCQPPGGPSKSWPEGPMANATAPTSAPQKLAPPQPTGR
PSPVPPAVPPAASPVMPPQTQSPGQPAQPAPMVQHHQKQNRITPIQKPRGLDPVELLQER
EYRLQARISHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEVVVCMRRDTAL
ETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYH
RSVSGKMQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDRRL
AYLLQQTDEYVANLTELVRQHKAAQAAKEKKKKKKKKKQENVDGLGSAVGPDGELLDETS
QMSDLPVKVIHVESGRILTGAEAPKAGQLDTWLEMNPGYEVAPRSDSEDSGSEEEEEDTT
DWRLLIMSEDRSRSGLLEEEEEEQANPPAQTPAPEEKKKIQDPDSEEVSELDARQIIENA
KQDVDDEYSAPLSSIHGLQSYYAVAHAVTERVDIQSTLLVNGLLKQYQVKGLEWLVSLYN
NNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVS
RISYKGSPAARRAFVPLLRSGKFNVLLTTYEYIIKDKHVLAKIRWKYMIVDEGHRMKNHH
CKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCNTFEQWFNAPFAMT
GEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRH
MQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIV
QGADLYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFTYRSFKYLRLDGTT
KSEDRGMLLKTFNEPNSHYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRA
HRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAI
LEHEEQDESEVVAAEVKGSEGHTEEDEVPDDETVNQMIARHEEEFDLFMRMDLDRRREEA
RNPKRKPRLMEEDELPNWILKDDAEVERLTCEEEEEKMFGRGSRQRKEVDYSDSLTEKQW
LKAIEEGNLEEIEEEVRQKKARKRKRDVDPPLVMATTSTRSSRDKDDDEKKKKKRGRPPA
EKLSPNPPNLTKKMKKTVDAVIKYKDSSTGRQLSEVFIQLPSRKELPEYYELIRKPVDFR
KIKERIRNHKYRSLNDLERDVMLLCQNAQAYNLEGSLIYEDSIVLQSVFTSVRQKIEKEE
DSEDDSEEGEEEEEEGSESESRSVKVKIKLGRKEKSQDRVKGRKRSSRASKSKPVVSDDD
TEEEVDEERSGTGSEED
NT seq
4914 nt
NT seq
+upstream
nt +downstream
nt
atgtcaactcctgatcctccaatgggaggcacacctcgcccaggcccctcaccaggacct
ggaccttctcctggatcaatgctaggccccagtcctggaccctcacccggctctgcacac
agtatgatgggaccaagccctggtcccccatctgccagtcattccatgactccacagggg
cctggaggttatgctgcagaaagcattcatcaacttcataaggcaatggaatcaatgcat
gaaaaggtgatgcccgatgacccacgttacagccagatgaaatccattagcatgaggtca
ggaggacacagtggcatggcaccaccacctagccccatggaccagcattctcaaggttac
ccttctcctctggggtgtactgagcatgccccaagtccagtacctgctaatggccctcct
tcggtaccccctatgtcttctggactaggtggtgttccaatggatggcggggaacctcag
acactgggacagcaaaaccgtggaccctctcctttcaaccaagggcaactgcatcagctg
cgagcacagatcatggcatacaagatgctagcaagaggacaacccattcctgaccacttg
cagttggctatccaagggaagagaccaccacctggaatgcagcagcagatatcatcacta
cctccgccctccacccctggaactggagtagcttcaggcccagctcctgggaattacaac
aggccgcttggtatgggaggatctaacatgatgcctccaggatctgctggtgtcaatcag
ggaatgcaatgtcaacctcccggcggcccctcaaaatcctggccagaaggtccaatggcc
aatgccactgcaccaaccagcgccccccaaaagctggctccccctcaacccactggtcga
ccttccccagtgccaccagctgtgccccctgctgcctccccagtcatgccacctcagaca
cagtcaccaggtcagccagctcagccggcccctatggtgcagcaccatcagaagcagaac
cggatcacccccattcagaaaccgcgagggttggacccagttgaacttctccaggaacgc
gagtatcggttgcaagcacgcatttcccatcggatccaagaattggaaaacctccctggc
tcattagcaggagaccttcgcacaaaagcaaccattgaactcaaggctctgcggctcctt
aatttccaaaggcagcttcggcaggaagtggtggtgtgtatgaggagggatacagccctc
gagacagcgctgaacgcaaaggcttacaagcgcagcaagcggcagtcactccgcgaggca
cggatcactgaaaaactcgagaaacagcagaagatcgagcaagaacgaaagcgcagacaa
aaacatcaggaatacctcaatagcattctgcagcatgcaaaggacttcaaggaatatcat
cggtcagtttctgggaagatgcagaaactgacaaaagcagtggccacgtaccatgcgaac
actgagcgtgagcaaaaaaaggagaatgaacggattgagaaggagaggatgaggagactg
atggcagaagatgaagaaggctatcgaaaactgattgaccagaagaaggaccgacgcctg
gcgtacctgctgcagcaaactgatgaatacgtagccaatctgacagaactcgtccgacag
cacaaggcagcacaggctgcgaaagagaaaaagaagaaaaagaagaagaagaagcaggaa
aatgtggacggtttgggttctgctgttggccctgatggtgagctcttggatgagactagc
cagatgagcgatttaccagtgaaggtgattcatgtggaaagtggacggattctgactgga
gctgaggcaccaaaggctgggcagctggacacctggttggaaatgaatcccggctatgag
gtggctccgcgttctgacagtgaagacagcggctctgaggaagaggaagaggatacgaca
gactggaggctgctaatcatgtcggaggacaggtctcgttcgggactgctggaagaggaa
gaggaggagcaggcaaacccaccagcacagactcctgcaccggaggagaagaagaaaatc
caggatccagacagtgaagaagtgtctgagctggacgcaaggcaaatcatagagaacgct
aagcaggacgtggatgatgagtacagcgcaccactatctagtatacatggtctgcagtcc
tattatgcagtagctcatgcagtgacggagagagtcgatattcagtctacgctgcttgtg
aatggtttactcaaacaatatcaggtcaaaggtctggaatggcttgtctcgctgtacaat
aacaacctgaatggaatccttgctgatgagatgggcttgggaaagaccattcagacgatc
gcactcatcacttacctcatggagcataagcgcatcaatggacccttcctgatcatagta
cctttatcaacgctgtcaaactgggcctatgagtttgataagtgggcgccatcagtatca
cggatctcatataagggttctcctgcagctcgaagggcatttgttcctctgcttagaagt
gggaagttcaatgtcctactcaccacttatgaatacatcatcaaagacaagcatgttctt
gccaagatccgttggaagtacatgatagtggatgaaggtcaccgtatgaagaaccaccac
tgtaagctaacacaggtgctgaatacgcattatgtggcaccacgccgcctgttgctcact
ggcactccactgcaaaacaagctgcctgagctgtgggcactcctcaacttcctgctgccc
actattttcaaaagctgcaacacgtttgagcaatggttcaacgcccccttcgccatgaca
ggagaaaaggtggatctaaatgaagaggagactattctgatcatcagacgtttgcacaag
gtcctccgccctttcctgttgaggcgattgaaaaaggaagttgaagctcagctgcctgag
aaggtggaatacgtcattaaatgtgacatgtcagctttgcagagagtactgtaccgccac
atgcaagccaagggagtgctgctgactgatggctcagagaaggataaaaagggcaaagga
ggcacaaagacactgatgaacaccattatgcaactgagaaagatttgcaaccacccatat
atgtttcagcacattgaggagtctttttcagaacacttaggattcactggaggcattgta
caaggggctgatctttaccgagcctcggggaagtttgaactgttggacaggattctcccc
aagctgcgagccaccaatcacagagtgttgctcttctgccagatgacctcactgatgacc
atcatggaagattacttcacataccgcagcttcaagtaccttcgcctggacgggaccacc
aaatctgaggaccgtgggatgctgctgaagactttcaatgagcccaactcccattacttt
atcttcctgctcagcactcgggctggaggtctaggcctcaaccttcaggctgcagacact
gttgtcatttttgacagcgactggaatcctcaccaagacttacaagctcaagatcgtgct
caccgcatcggacagcaaaatgaagtacgcgtgctgcgcctgtgcactgtgaacagtgtg
gaggaaaagatcttagcagcagctaaatacaagctcaacgttgaccagaaggtcatccaa
gctgggatgttcgatcagaagtcctccagccacgagaggcgggcatttcttcaggctata
ctcgaacatgaggagcaggatgaatctgaggttgtggcagcggaggtgaaaggatcggaa
ggacatactgaagaagatgaagttcccgatgatgagacagtgaatcaaatgatagccaga
cacgaagaggaattcgacctcttcatgcggatggatttggaccgccgtcgcgaagaggcc
agaaacccaaagcggaaaccacggttaatggaggaagatgagcttccaaactggatcttg
aaagatgatgctgaggtggaaaggctgacatgtgaggaggaagaggagaaaatgtttggc
cgaggctcgcggcagcgcaaggaggtggactacagcgactctttaaccgagaaacagtgg
ctcaaggccatagaagagggcaaccttgaggagattgaagaagaagttcgtcagaaaaaa
gcccgcaaacgaaagagagatgtcgacccaccattggtcatggcaaccacgagcacgcgt
agcagccgggacaaggatgatgatgaaaagaagaaaaaaaagcgtgggcggccaccagca
gaaaaattatcaccaaaccccccaaacctcaccaaaaaaatgaagaaaactgtagatgca
gtgatcaaatacaaggacagcagtactggccgacagctcagtgaagtcttcatccaactt
ccatcacgcaaggagcttccagagtactatgaactcatccgcaaacccgtcgacttccgg
aagataaaggaacggatccgtaatcacaagtaccgtagcctcaatgacctagaaagagat
gtgatgttgctatgtcagaatgcacaggcctacaacctggagggatcactgatctatgag
gattcaattgtacttcagtctgtttttaccagcgtacgacagaaaatcgagaaggaggaa
gatagtgaagatgatagtgaggaaggagaggaggaggaggaggaaggatccgagtcagaa
tctcgttcagtgaaagtgaaaattaagctaggccgaaaggagaaaagccaggatcgagtg
aaagggcgcaaacgctccagtcgtgcctctaaatccaaacctgttgtaagcgatgatgat
acagaggaggaagtggatgaggaacggtcaggaactggtagcgaagaagattaa
DBGET
integrated database retrieval system
