Hemiscyllium ocellatum (epaulette shark): 132836140
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Entry
132836140 CDS
T09720
Symbol
stx5a
Name
(RefSeq) syntaxin-5a
KO
K08490
syntaxin 5
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
132836140 (stx5a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hoc04131
]
132836140 (stx5a)
Membrane trafficking [BR:
hoc04131
]
SNARE
Syntaxin (Qa)
Stx-cisGolgi
132836140 (stx5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNARE
Syntaxin-5_N
Apolipoprotein
DUF16
DUF5063
YwqH-like
Vac_Fusion
Acyl-CoA_dh_C
SEO_N
BLOC1_2
MCPsignal
DUF7260
Motif
Other DBs
NCBI-GeneID:
132836140
NCBI-ProteinID:
XP_060711441
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Position
46:complement(10011952..10057147)
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AA seq
348 aa
AA seq
DB search
MNTRRRHGPSSTEQGVYLGPAQTQVLTSKSLPSVPVASGPVPPFQEEIMSCRDRTQEFVA
ACKSMQSRQNGLQVNKPLLNAVRQRSEFTTMAKRIGKDLSNTFSKLEKLTILAKRKSLFD
DKAVEIEELTYIIKQDINSLNKQIAQLQDFVRTKESQNGRHLQTHSNTIVVSLQSRLASM
SNDFKSVLEVRTENLKMQRNRREQFSHATVSSLPPSAANGYGGSVLLQDDARRSGDIAID
MDAKTSQQLQLIDEQDSYIQSRADTMQNIEATIVELGSIFQQLAHMVKEQEETIQRIDAN
VEDTELNVAAAHTEILKYFQSVSSNRWLMIKIFLILAVFFIVFVVFLA
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgaatacgcgacgacgccacggtccctccagtactgagcagggagtctacctcgggcca
gcacagacgcaagtcctcacttccaaatccctcccttcggtcccggttgcttctggccca
gtgcccccgtttcaggaagagatcatgtcgtgccgcgaccgcacgcaggagtttgttgct
gcttgcaagtccatgcagagcaggcagaatgggctgcaggttaacaaacctctcctgaat
gctgtgcgccagcggagtgagttcaccaccatggcaaaacggatcggtaaagatttgagt
aacacgttttccaagctggaaaagctgaccatattggcaaagcggaaatccttgttcgat
gacaaagctgtcgagattgaggagttgacgtacatcatcaaacaggatataaacagcctg
aacaagcagatcgcacaactacaagactttgtcagaaccaaggagagtcaaaatggccga
cacttacagacgcattccaacaccattgtggtctccctgcagtcccggctggcctccatg
tcgaatgattttaagtcggttctcgaagtgaggacagagaatctcaaaatgcagagaaac
agaagagagcagttctcacatgccacagtttcaagcctcccgccatcagctgcgaatggt
tatggtgggtcagtgttgctgcaagacgacgcacgcagatcgggggacatcgccattgac
atggacgccaagaccagccagcagcttcagctcatcgacgagcaggattcctacatccag
agcagagcggacactatgcaaaacatcgaagccaccatcgtggagctgggctccattttc
cagcagctcgcgcacatggtcaaggagcaagaggagactattcagaggatcgatgccaac
gttgaggacactgagctgaacgtggcggcggcgcacaccgagatcctcaaatacttccag
tccgtctcctcgaaccgctggctgatgatcaagatcttcctcatcctcgctgtcttcttc
atcgtcttcgtggtgttcctggcctag
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