Hemiscyllium ocellatum (epaulette shark): 132836151
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Entry
132836151 CDS
T09720
Symbol
syvn1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc04120
Ubiquitin mediated proteolysis
hoc04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
132836151 (syvn1)
04120 Ubiquitin mediated proteolysis
132836151 (syvn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hoc04121
]
132836151 (syvn1)
Enzymes [BR:
hoc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
132836151 (syvn1)
Ubiquitin system [BR:
hoc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
132836151 (syvn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-ANAPC11
zf-RING-like
zf-HC5HC2H
zf-Nse
zf-RING_Vps41
Endonuclease_7
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
132836151
NCBI-ProteinID:
XP_060711455
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All DBs
Position
46:4204849..4245280
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AA seq
623 aa
AA seq
DB search
MVRSTLATAASLVLTTTVVTHAYYLKRQFYPTVVYLTKSSPSMAVLYIQAFVLVFLIGKF
MRKVFFGQLRAAEMEHLIERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWLFHFRVVSLMGLLALLDLLFVNHACHSIMTRGASVQLVFGFEYAI
LLTMVLTIFIKYILHTIDLQSENPWDNKAVYMLYTELLTGFIKVLLYMAFMTIMIKVHTF
PLFAIRPMYLTMRQFKKAVTDAIMSRRAIRNMNTLYPDASLEELQQTDNVCIICREEMVT
GAKRLPCNHIFHTSCLRSWFQRQQTCPTCRMDVLRVTLPTQTPPPQQPQPQVPQTPLVPQ
QPNLPPGMPPFPPAMFPFWPPMGQHLFPQAPGAAPNVPQSNTSAPAGAEGQASAGEESRS
TETMSGTGLETPAAASIPGFPFSFPPFPSAPWVGMPPPPFGMPPMPMPPSGFAGLTDEEL
RAMEGQERQNLEARLQCLQNIHTLLDAAMVQIHQYLSVVATLSPPRPTATTSSAPSTEST
DPTSGSQVDSTGDSPPPAFDSTSAQSPLQPEEIGQSDLEGAVGYSVPDSAEVPDDEKDAL
SEPDAAELRRRRLRKLDLPSGRH
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atggtccgatcgacgttggccaccgcagccagcctggtgctcaccacaactgtggtcacc
cacgcctattacctgaagcggcagttttaccctactgtggtgtatctgactaaatccagc
ccaagtatggcggtgctgtacattcaggcgtttgttttggtcttcctcatcggcaagttc
atgcggaaggtgttctttgggcagctgcgtgctgcggagatggagcatttaatcgagcgt
tcctggtacgccgtgactgagacttgcttggcattcaccgtcttcagggatgacttcagt
ccacgctttgtggccctcttcaccctgctgctctttctcaagtgcttccactggctagct
gaggacagggtggactttatggaacggagtccaaacatctcgtggctgtttcacttccga
gttgtctcgctgatgggtttactggctctgttggatctgctgtttgtaaaccatgcctgt
cacagcatcatgacccggggagcatccgtccagctggtgtttggctttgagtatgccatt
ctcctcactatggtgctgaccatattcatcaaatacattctgcacaccatcgatcttcag
agtgagaatccctgggacaacaaggctgtgtatatgctctacaccgagctcttgacaggg
ttcattaaggtgctgctctacatggccttcatgaccataatgatcaaagttcacacgttc
cctctgtttgccatccgtcccatgtacctgaccatgaggcaattcaagaaggcagtgact
gatgccatcatgtcgagaagagcaattcgcaacatgaacacgctgtaccccgatgccagc
ctagaggaactccagcaaaccgacaacgtctgcatcatttgccgtgaggagatggtaact
ggagccaaacgcctcccgtgtaaccacatcttccacaccagttgcctccgttcgtggttc
cagcggcagcagacgtgccccacgtgtcgcatggacgtgctgcgggtcacgctccccacc
cagacgccgccgccgcagcagcctcagccgcaggtgccacagacccccctggtcccccag
caacccaatctgcctccagggatgccgccctttccgccagctatgttccccttctggccg
cccatgggccagcacctcttcccgcaggctcctggtgcagctccgaatgtgccacaatcc
aacacgtcagctcctgctggtgcagagggccaggcaagcgctggtgaagaatcccggagc
actgagaccatgtcagggactggattggagacgcccgctgctgcatcaatcccaggattt
cccttctccttccctcccttcccgtcggctccttgggtgggaatgcccccccctccgttt
ggaatgcctccgatgccgatgccaccttctggctttgccggattgacagacgaggagctc
cgagcgatggagggtcaggagcgtcagaacctggaagcgcggctgcagtgtcttcagaac
attcacacgctgctggatgcagccatggtgcagatccaccaatacctctctgttgtcgct
acactcagtccgcccagaccaacagcaactaccagctcagcaccaagtacagagtcaacg
gatccaacgtctggatcacaggtggattctactggagattcccctcctcctgctttcgac
agcacttccgcacaatctcccctgcaacctgaagaaatagggcagagtgacctggaaggg
gcagtgggatactccgtacctgactcggccgaagtcccggacgatgagaaggacgctctc
agtgaaccagatgcagctgaactgcgccgtaggcggctgcggaaactcgacctgcccagt
ggccgtcactga
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