Hemiscyllium ocellatum (epaulette shark): 132836244
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Entry
132836244 CDS
T09720
Name
(RefSeq) nuclear RNA export factor 1-like isoform X1
KO
K14284
nuclear RNA export factor
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc03008
Ribosome biogenesis in eukaryotes
hoc03013
Nucleocytoplasmic transport
hoc03015
mRNA surveillance pathway
hoc05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
132836244
03015 mRNA surveillance pathway
132836244
03008 Ribosome biogenesis in eukaryotes
132836244
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
132836244
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hoc03019
]
132836244
03009 Ribosome biogenesis [BR:
hoc03009
]
132836244
Messenger RNA biogenesis [BR:
hoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
132836244
mRNA cycle factors
Stress granule specific factors
132836244
Ribosome biogenesis [BR:
hoc03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
132836244
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_NXF1-5
NXF_NTF2
Tap-RNA_bind
TAP_C
NTF2
UBA_8
LRR_NXF2
LRR_8
LRR_4
RRM_NXF1-2
LRR_9
YopE_N
Citrulline_exp
Motif
Other DBs
NCBI-GeneID:
132836244
NCBI-ProteinID:
XP_060711579
LinkDB
All DBs
Position
46:complement(9871685..9943064)
Genome browser
AA seq
654 aa
AA seq
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MSEDGRHYSAPQQSGIVHNGFRGDGRKPGRRKWRLRKRGTYREHDDRVGGGFPFRKKKGR
GPFRGKMYSEGSHKPRNRGSGGPNPRSRFEDDDGDVTMNDHELPRSRFTPYGARPSRRPD
SWHDRDGGPSSIQVTVKQNSERNASANARRSWFKVTIPFGKKYDKSWLLSNMHNMCSVPF
TPVQFHYDGNKAVFYVEDSTAANALKQISRRIVDKDLYRVAIIISSSVPPSSVSNELKSE
EIEHIKQCMSKRYDGSQQALDLNSIRSDPDLVSQNIEVVLNRRSSMSAVIKIIEENIPEL
LSLNLGNNRLYRLDDLADLITKAPSLKILNLSRNELKSERDLDKIKGFKLEELWLDGNPL
CDSFRDQATYVSAVREKFPKLLRLDGHELPPPISFDVETPTTLPSCKASYFGTDEIKVLV
SRFIQQYYSVYDSTDRQGLLDAYHDTACCSLSIPFSSQNPARSSLGEYFKESRNVRRLKD
PTLRAKLLKHTRLNVVAFLNELPKTQHDIASFVVDVSTQTNTLLCFTVHGVFKEVDSKSR
ESVRAFSRVFIAVPAGNAGLCIVNDQLFIRNATTEEIRKAFVTPAPTPSSSPVPTLTAPQ
QEMLQAFSQQSGMNIEWSQKCLQDNEWDFNQAAQIFTQLKAEGKIPEIAFVKQL
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaggacgggcggcactacagcgccccccagcaatcaggaatcgtgcataatgga
ttccggggggatggaagaaagccaggaagacggaaatggagactgagaaaaagaggcacg
tatagagaacatgacgacagagttgggggtggttttccatttcggaaaaagaaaggacgc
ggtccattccggggtaagatgtacagcgagggaagtcacaaacctaggaatcgaggcagt
ggaggacccaacccacggtcgcggttcgaggatgatgatggcgatgtgactatgaatgat
catgagttgccacggtcacgatttacaccgtatggtgcaagaccatctcgtcgcccggac
agctggcatgatcgtgatggagggccctcaagcattcaagttacagtgaagcaaaattca
gagagaaatgcaagcgccaatgcacgccgatcctggtttaaagtcactattccttttgga
aagaaatatgataaatcctggcttttgtcaaacatgcataatatgtgcagtgttcccttt
actcctgttcagtttcactatgatggcaataaagcagtattctatgttgaagattctaca
gctgcaaatgctttaaagcagatatcgagaagaattgttgataaggatttgtacagggtg
gccatcatcattagttcttcggtgccgccatcttccgtttcaaatgagctcaaatcagag
gagattgaacacataaagcagtgtatgagtaaacgttacgatggatcacagcaagcccta
gatctaaacagcatacgtagtgacccagatctcgtctctcagaatattgaagtggtgtta
aacagaaggagttccatgagcgcagtcatcaaaatcatcgaggagaacattccagagttg
ctttcactcaacctgggcaataacaggctctaccgactggatgacctggcagacctgatc
accaaagcgcccagtttgaaaattttaaatctttccagaaacgagctcaaatccgaaaga
gatctggacaaaataaaaggcttcaagctggaagagctgtggttggatgggaaccctctg
tgtgacagcttccgggatcaggctacatatgtcagtgctgtcagggaaaaatttccaaag
ttactcagactggacggtcatgaactcccacctcccatttcctttgacgttgagactcca
actacacttccttcgtgcaaggctagttactttggtacagatgaaatcaaagtgcttgta
tcacgattcatacagcagtactattcggtttatgattcaacagacaggcaagggctgctg
gatgcctaccacgatacagcttgctgctcgctcagtattcccttttcatcacagaaccct
gccaggagcagtctgggagagtatttcaaggagagcagaaacgtgaggagactgaaggac
ccaacacttcgggcaaagctgctgaaacacaccagactgaatgttgtcgcctttctcaac
gaactcccaaagacacagcatgacatagcctcctttgtggtggatgtgagcactcaaaca
aatacattactatgttttactgtacatggagttttcaaagaagtggatagtaaatccagg
gagtctgtgagggcgttctcgagagtgttcattgctgtacctgctgggaatgcagggctc
tgcattgtgaatgaccagctgttcatcaggaatgccaccactgaggagatccgcaaggcc
tttgtgacgccagcacccacaccgtcaagcagtccggtgcccaccctcacagcaccccag
caggaaatgctgcaggccttctcccagcagtcgggcatgaacatagagtggtcgcaaaaa
tgtctgcaagacaacgagtgggacttcaatcaagctgcccaaatcttcacacagcttaag
gctgaaggaaaaattcctgaaatcgcgtttgtgaagcagttatga
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