Hemiscyllium ocellatum (epaulette shark): 132836328
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Entry
132836328 CDS
T09720
Symbol
sf1
Name
(RefSeq) splicing factor 1 isoform X1
KO
K13095
splicing factor 1
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132836328 (sf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hoc03041
]
132836328 (sf1)
Spliceosome [BR:
hoc03041
]
Complex A
Other components
Complex A specific factors
132836328 (sf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
KH_1
zf-CCHC
KH_12
zf-CCHC_5
zf-CCHC_3
KH_NusA_1st
Motif
Other DBs
NCBI-GeneID:
132836328
NCBI-ProteinID:
XP_060711745
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All DBs
Position
46:2730770..2751492
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AA seq
654 aa
AA seq
DB search
MASGAHTSPAGGKMLQAVANKRGIESPALDDDFGQKRRKRSRWSNETSDQKTVIPGMPTV
IPPGLTRDQERAYIVQLQIEDLTRKLRTGDLGIPPNPEDRSPSPEPIYNSEGKRLNTREF
RTRKKLEEERHNLIQEMIALNPDFKPPADYKPPATRVSDKVMIPQDEYPEINFVGLLIGP
RGNTLKNIEKECNAKIMIRGKGSVKEGKVGRKDGQMLPGEDEPLHALVTANTMENVKKAV
EQIRGILKQGIETPEDQNDLRKMQLRELARLNGTLREDDNRILRPWQSTEPRSITNTTLC
TKCGGAGHIASDCKFSRPGDPQSAQDKARMDKEYLSLMAELGEAPVPASSSSAHTSSAQP
SVPRTSGPASSQQQLPNRPPWMSSGPSDANRPYHGMHGGPHPGFPPPMPSMGGHPLSHNP
NGPPPPWMQPPPPPMSQGHPPVHPPMNMMHHPMGMLPPPPPPPASQPPPPPSGPIPPWQQ
QQAQQQQQQQPPPPPSSSMASSAPLPWQQSEYQHHDDYYSERPSMAAAAAAASASAAAAA
ASATAAPGAAHPRLQRRPAPALACRPFYGPPSPWGPASPSPRGAAPTAPSPARHGRHDVR
PAPSPAHGPLQLCDDGNGRARHATLWNAPRPAPSPSPDLKHPFFRYRYPRTMFR
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcggggcccacacctcccccgcgggcggtaagatgctgcaggccgtggccaac
aaacgcgggatcgagagcccagcgctcgacgatgactttggacagaagaggaggaaaaga
agtcgctggagcaatgagacttcggatcagaaaacagtcattcctgggatgccaactgtg
attccacctggactgacccgtgatcaggagcgtgcttatatcgtgcaacttcagattgaa
gacctgacccgcaaactgcgtactggagaccttggtatccccccaaaccctgaggacagg
tccccctcacctgagccaatctacaacagcgagggcaagaggctcaacacccgagagttc
agaactcggaagaagctggaagaggagaggcacaacctcattcaggagatgattgccctc
aaccctgacttcaaaccgccagcagattacaagccaccggccacacgtgtgagtgacaag
gtgatgatcccgcaggatgaatacccagagatcaattttgtcggcctgctgattggaccc
agaggcaacacgttgaagaatatcgagaaagaatgcaatgccaaaatcatgatccgaggg
aaaggctcagtgaaggagggcaaggttggccggaaagatggacagatgctgccaggggaa
gatgagccactgcatgctctggtcacagcaaatacgatggagaatgtgaagaaggcagtg
gagcagatccgaggtatcctcaagcaaggtattgaaaccccggaggatcagaatgacctg
cggaagatgcagctgagagagttggcccgactcaatggcactctccgggaagatgacaac
aggatactgagaccttggcagagcacagagcccaggagcatcaccaacacaacgctgtgt
acgaagtgtggtggggcaggtcacattgcttctgactgcaaattctccaggccaggagac
ccacagtctgctcaagacaaggcacgaatggacaaggagtatttgtcgctgatggccgag
ctaggagaggctccagtgcctgcatcatcgtcttcagcacatacgagctccgcacagccg
agtgtcccacggacttctgggccagccagcagtcagcagcagcttccaaataggcctccg
tggatgagctctggtccctcggacgccaacaggccctaccacgggatgcatggtgggcca
cacccgggtttcccccctcctatgcccagcatgggtgggcatccgctgtcccacaatccc
aatgggcctccacctccatggatgcagccaccgccacctccaatgagccagggtcaccct
cctgtgcacccccccatgaacatgatgcaccacccaatgggcatgttgccgccgccgcct
ccacctccagccagccagcctccacccccacccagtggccccatcccaccctggcaacaa
cagcaggcccagcagcagcagcagcagcagccgccaccaccacccagcagcagtatggcc
tccagtgcacccttaccctggcaacagagtgaataccagcaccacgacgactactacagc
gagcgtccctccatggcagcagcagccgcagcagcctcagcctcagccgcagccgcagca
gcctcagccacagcagccccaggtgcagcccacccccgcctccagcgccgccccgccccc
gcccttgcctgccgccccttctatggtcccccctccccctggggtccagcctccccttcc
ccccggggcgccgcccccaccgccccctcccccgcccggcacggcaggcatgatgtacgc
cccgccccctcccccgcccatggacccctccaactttgtgatgatgggaatgggcgtgcc
aggcatgccaccctttggaatgccccccgccccgccccctccccctccccagacctaaag
cacccctttttccgataccgatatcctcgaaccatgttcagatag
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