Hemiscyllium ocellatum (epaulette shark): 132836591
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Entry
132836591 CDS
T09720
Name
(RefSeq) hypoxia-inducible factor 3-alpha-like isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc04137
Mitophagy - animal
hoc04140
Autophagy - animal
hoc04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
132836591
04137 Mitophagy - animal
132836591
04148 Efferocytosis
132836591
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hoc03000
]
132836591
Transcription factors [BR:
hoc03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
132836591
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PAS_11
PAS_3
bHLH_HIF1A
HIF-1
PAS
PAS_9
PAS_4
HIF-1a_CTAD
PAS_2
HLH
Motif
Other DBs
NCBI-GeneID:
132836591
NCBI-ProteinID:
XP_060711955
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Position
47:complement(2860669..2900484)
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AA seq
820 aa
AA seq
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MPAKGLSPAGEQRRERSREAARSRRGRETELLYQLAQQLPLGPGVRSHLDKAAVMRLTLS
YLHLRGLLHSARADRADGDGQFDGFSLRALDGFVMVLTAEGDIVYLSENVSQYLGLSQLD
LIGHSVFDFVHPCDEEELKDLVTPHHAPLLKQEVQTERDFFLRMKSTLTSRGRTVAVKSA
SWKVLHCTGHMKRCVFPDSGFPDSPKTFLVMICEPIPHPSNIEISLDNKTFLSQHSLDMK
FTYCDQKITDLIGYQPKAMLGHTSYEFYHSLDANHMTKTHRILLSKGQVISPQYRFLARS
GGYVWLRTQASTISSSKSNQPQSIICINSVLSNVMEESVTFSLGQTRLLTPDADPENGQR
LLSQWEENPKKSDELGPAPGDSVVSLDLAGQRDTKAFHFTRRLPDDGQAPLSPEDFCSPA
LCKLLSPIFNGLEMSSSTDSKPLSKQPERTTEDPDTPGVTLPKPGSSQTAGVNIEESEKN
LLTADTKALQAKTTQEAMELDLEMLAPYISMEEDFQLNSLECAEDKDGQACADIHPEPRG
RSARATESRSFSGSLTEPRNPGPASSRPRSCSFHGVRPSVQDHPQREGDSAHPEGNSAAL
QRSCSVTNLSMAPGPGPDPAPGQAPASGYCTLAFGGPAFTVAVKNVLLALFQPQTTEAKV
QTPSSKGQEATSAGAAQGLEPSDLLDTAGLSGESAQHALSKQRSQRDSEFRRNLGQLSPQ
ILDLRNLKRKHSLLVGNLQDSNLDVSSVADIVQVTAKRLKSLETQQAETQTETVPSGTPM
TLTMQLLGKEVPAPPELTRYDCEVNAPLPEETVSCRARTY
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atgccggccaaggggctctctcccgcgggggagcagcgcagggagcggtcccgggaggcg
gcgaggagccgcagggggagggagaccgagctcctgtaccagctcgcccagcagctgccc
ctgggccccggcgtccgctcacacctcgacaaggcggccgtcatgaggctcaccctcagc
tacctgcacctccgggggctgctccacagcgcaagggcagaccgagctgacggggatggt
cagttcgatgggttttctctgcgagccctcgatgggtttgtgatggtgctgactgcggaa
ggagacattgtttatttgtcggagaatgtcagccagtacctcggactgagccagttggat
ctgattggacacagtgtgtttgattttgttcacccgtgcgacgaagaggaactgaaggat
cttgtgaccccccaccacgcacccttgctaaagcaggaggtccagacagagagagatttt
ttcctgaggatgaaatccactctgaccagccgagggcggacggtcgctgtcaagtcagcg
agttggaaagtgctgcactgtacggggcacatgaagagatgtgtgtttcctgacagcgga
ttcccagattccccaaagaccttcctggtgatgatctgtgaaccgatcccacacccatcc
aacattgagatctccctggacaacaaaaccttcctgagtcagcacagcttagacatgaag
ttcacttactgtgaccaaaaaatcactgatctgattggttatcagccaaaggcaatgctt
ggtcacacctcgtatgagttctaccattccctcgacgccaatcacatgaccaagacgcac
cgtatcttgctgagtaaggggcaggtgatttctccccagtaccgtttcctggcgcggtct
gggggttacgtttggctgcgaactcaggccagtaccatctccagcagcaagagtaaccag
cctcagtcgatcatctgcatcaactccgtgctcagcaatgtgatggaggagtcagtcacc
ttctccttgggtcagaccaggctcctgactcctgacgccgatcccgagaatggccagcgc
ctcctgagccagtgggaggagaatcccaagaagtcggatgagctgggccctgctcctgga
gacagcgtcgtttccctggacttggcaggtcaaagggatacgaaagcgtttcacttcacc
agaaggctcccagatgatggccaggcccctctgagcccggaggatttctgcagccccgct
ctctgtaaactcctgtccccaatctttaatggtctggagatgagctccagcacggactcc
aaaccactcagcaagcagccggagagaacgacagaggacccagacacaccaggggttaca
ctgcccaaaccgggcagctctcagacagccggcgtgaacattgaggagtctgagaaaaat
ctgctcacagccgataccaaagctctgcaagccaaaacaacccaggaggcgatggagttg
gatctggagatgttagcgccctacatctccatggaggaggacttccagctgaacagcctc
gagtgcgctgaagataaggacggacaggcctgtgctgacattcacccagagccccgcgga
aggagcgccagagcgacggaatctagaagtttctctgggagcctgaccgagccaaggaac
cccggccccgccagcagccgcccccggtcctgcagcttccacggggtgcggcccagtgtg
caggaccatcctcagagagagggcgactcagcccacccagagggaaactctgctgctcta
caacgttcctgcagcgtgaccaatctcagcatggccccaggcccaggcccagacccagcc
ccaggccaggccccggcctctggttactgcacactcgctttcggaggaccagcattcact
gtagctgtgaagaacgtcctcctggctttattccagccccagaccactgaggccaaagtt
caaactcccagcagcaaaggtcaagaagcaacatccgcaggcgctgcccagggcctggag
ccgagtgatctcctggacactgctggactcagcggagaatcagcccagcacgcgctgtcc
aaacagaggtcgcagcgtgactcagagttcaggagaaacctcgggcagctcagtccccag
attctggaccttcgtaacctcaaaaggaaacactctctgctggtcgggaacttgcaggat
tccaatttggatgtttcgagtgtggctgacattgtccaagttacagcaaagcgtttgaaa
agtctggagactcagcaagctgaaacgcagacagagactgtgccgtctgggacaccaatg
acgctgaccatgcagttacttgggaaggaggtgcctgctcccccagagctgacccgttat
gactgtgaagtgaatgctccattaccggaagagaccgtctcttgcagggcccggacttac
tga
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