Hemiscyllium ocellatum (epaulette shark): 132836740
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Entry
132836740 CDS
T09720
Symbol
si:ch211-11n16.2
Name
(RefSeq) zinc finger FYVE domain-containing protein 1
KO
K17603
zinc finger FYVE domain-containing protein 1
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
132836740 (si:ch211-11n16.2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
hoc01009
]
132836740 (si:ch211-11n16.2)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hoc04131
]
132836740 (si:ch211-11n16.2)
03029 Mitochondrial biogenesis [BR:
hoc03029
]
132836740 (si:ch211-11n16.2)
Protein phosphatases and associated proteins [BR:
hoc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
132836740 (si:ch211-11n16.2)
Membrane trafficking [BR:
hoc04131
]
Autophagy
Other autophagy associated proteins
Others
132836740 (si:ch211-11n16.2)
Mitochondrial biogenesis [BR:
hoc03029
]
Mitochondrial quality control factors
Mitophagy factors
Other mitophagy factors
132836740 (si:ch211-11n16.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FYVE
GBP
MMR_HSR1
YfhO
Motif
Other DBs
NCBI-GeneID:
132836740
NCBI-ProteinID:
XP_060712149
LinkDB
All DBs
Position
47:5481802..5520931
Genome browser
AA seq
643 aa
AA seq
DB search
MGELKGHPLTGESSKNFLLVDENETLQVPDEESFVKKLGVPGDQAIKVLSIFGNTGDGKS
HTLNAAFFGGREVFRTSDTQDSCTVGVWAAYEPSLGLVLLDTEGLLGATSKQDRRRRLLL
KVLAVSDLVVYRTRAERLHNDLFCFLGNASRAYLRHFSQELQAASQRLGLGVPMSSLGPA
LIVFQETSNTKLLGGDSQAPGNAEQLLQKRFHQLGLSTETFNSVEYVGTQTTSPPTDFSG
FLEVVRQRANSTLTRCRRSPAIVYNVLKALSIRFNGEIKDSRMVADCFFPDEYFSCSRVC
LSCGAHCTNSMNHLKDNVPHQATGRCRYMHQYNNKVLICRVCYERGWEVTVNPKTSASTD
SKWFGLATYAWSGYVLECPNCGVIYRSRQYWVGNQDPEASVVRPELKHVWQGADPFLRPN
HNGAQRVLDGVSFMIQSVSEYSARPSKAISSWLTDRVAPDYWRPNTQITECHQCKKLFEE
GDRKHHCRACGEGCCDACSSKSMPVPERGWGSAAVRVCDNCFRTAGESTGKELESAREGK
GLLARRITEVAQSTLDTMTSAVEYPLGFVKEVARPDYWVPDHELVKCHRCAKPFSGTTAK
HHCRACGLGICGQCSPELRTVPSRGWHHPVRVCLDCSEQKGEL
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgggagaactgaagggtcaccctctcactggggagagcagcaagaacttcctgctggtg
gacgagaatgaaacgttacaggtgccggatgaggagagttttgtgaagaaactgggagtg
ccgggagaccaagccatcaaggtcctctccatcttcggcaatacgggggatgggaagtct
cacaccttgaacgccgccttcttcggcggccgggaggtgttccgcacctcggacacccag
gactcgtgcacggtgggcgtgtgggcggcctatgagccatcgctgggcctggtcctgctg
gacaccgagggcctgctgggagccaccagtaaacaggaccgccggaggcgtctgctgctg
aaggtgctggccgtctccgacctggtagtgtacaggacgcgggctgagcggctgcacaac
gacctcttctgtttcctgggcaacgcctcccgggcctacctccgccacttcagccaggag
ctgcaggccgcgagccagcgcctggggctaggagtgccgatgtccagtctcggaccagcc
ctcatcgtcttccaggagacctccaacaccaagctgctgggtggtgactcccaggctcca
gggaatgcagagcagctgctgcagaagaggttccaccagcttggtttgagcacggaaacg
ttcaactccgtcgagtatgttggcacacagaccacgagcccccccaccgatttctctggg
ttcctggaggtggtgcgtcagagagcaaacagcactttgacccgctgtcggagatcaccc
gccattgtctacaatgtgttaaaggctctgagtatcagattcaacggtgagattaaagac
agcaggatggtggccgactgtttcttccccgatgagtacttcagctgctccagagtgtgc
ctctcctgtggggctcactgtaccaacagcatgaaccacttgaaggacaatgtcccacac
caggcaacggggagatgtcgctacatgcaccagtacaataacaaggtgttaatctgcagg
gtgtgttacgaacgaggctgggaagtaactgtcaaccccaaaacctccgcatcgacggac
agcaagtggttcggactcgcgacctatgcctggtcagggtatgttctggaatgtccaaac
tgtggggttatctaccggagcagacagtactgggttggaaaccaagatcccgaggcctca
gttgtacgtcctgaactgaaacacgtctggcaaggggcggacccattcctgagaccgaac
cacaacggggcgcagcgagtgctggacggtgtcagctttatgatccagtcggtctccgag
tacagcgcacggccaagcaaagccatcagctcctggctgaccgatcgagtggccccggat
tactggaggcccaacacccagatcacggagtgccatcagtgcaagaaacttttcgaggag
ggggaccgtaaacatcactgccgtgcgtgcggagagggttgctgtgacgcctgctccagt
aaaagcatgccagtcccggagcgaggctgggggtccgctgccgtgagagtgtgtgacaat
tgcttcaggacagcgggggaaagcacaggaaaagagttagagtcagcgagagaaggcaaa
ggattattggctcgcagaattaccgaggtggcacagagcactctagatacgatgacttca
gcagtcgaatatccgcttgggtttgttaaggaagtggcaaggcctgattattgggtgcca
gatcacgagctggtcaagtgccaccgctgcgcgaagcccttttcaggcacgacggccaag
caccactgccgagcctgcggcctaggcatctgtggtcagtgctccccggagctgaggact
gtgccatctcggggttggcaccacccagtcagggtctgtctggactgtagcgagcagaaa
ggggagctctga
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