Hemiscyllium ocellatum (epaulette shark): 132836805
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Entry
132836805 CDS
T09720
Symbol
ercc2
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPD isoform X1
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc03022
Basal transcription factors
hoc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
132836805 (ercc2)
09124 Replication and repair
03420 Nucleotide excision repair
132836805 (ercc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hoc03021
]
132836805 (ercc2)
03036 Chromosome and associated proteins [BR:
hoc03036
]
132836805 (ercc2)
03400 DNA repair and recombination proteins [BR:
hoc03400
]
132836805 (ercc2)
Enzymes [BR:
hoc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
132836805 (ercc2)
Transcription machinery [BR:
hoc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
132836805 (ercc2)
Chromosome and associated proteins [BR:
hoc03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
132836805 (ercc2)
DNA repair and recombination proteins [BR:
hoc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
132836805 (ercc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HBB
DEAD_2
Helicase_C_2
DEAD
ResIII
SesA
UxuA
AAA_11
nSTAND3
Motif
Other DBs
NCBI-GeneID:
132836805
NCBI-ProteinID:
XP_060712259
LinkDB
All DBs
Position
47:complement(407322..453298)
Genome browser
AA seq
760 aa
AA seq
DB search
MRLNIDGLLVYFPYDFIYPEQYSYMLELKRILDAKGHGVLEMPSGTGKTVSLLSLLVAYQ
MTYPTEVTKLIYCSRTVPEIEKVIEELRKLIDYYEKLSGNKIEFLALALSSRKNLCIHPE
VSSQRFGKEVDGKCRSLTASHIRMQHSSNPTVPICQFYEEFDLHGKQVPLTSGIYNLDDL
KAYGKQKGWCPYFLARYSILHANIIVYSYHYLLDPKIADLVSKELSRKSVVVFDEAHNID
NVCIDSMSVNITRRMLDQCQNNIETIQKTIQHIKETDAAKLKEEYRQLVEGLKEAHIARE
TDVYLANPVLPDEILQESVPGNIRTAEHFVGFMKRFVEYLKSRLRVHHVVAENPPSFLKD
VFDKVCIERKPLRFCSERLRSLLQTLEIADLSNFSPIILVSNFATLVSTYAKGFTIIMEP
FDDKTPTIINPILHFSCMDPSIAIKPVFERFQSVIITSGTLSPLDMYPKILDFRPVIMAT
FTMTLSRTCLCPLIVGRGNDQVTISSKFETREDIAVIRNYGNLLLEMSAIVPDGIVSFFT
SYHYMENIVASWYEQGILENIQRNKLIFIETQDAAETSVALEKYQEACENGRGAILLSVA
RGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLEYIRDQFQIRENDFLTFDAMRHA
AQCVGRVIRGKTDYGLMIFADKRFARADKRGKLPRWIQEHITDSNLNLTVDEAVQIAKHF
LRQMAQPFQQEDQLGLSLLSLDQLESEEILSRIQQISHQV
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgagattgaatattgatggattgttggtgtatttcccttatgatttcatctatcctgag
cagtattcctacatgttggagctgaaaaggattcttgatgctaagggacatggggttttg
gaaatgccgtcaggcacagggaagactgtgtcactgctttcactgcttgtggcctatcag
atgacatatccaacagaagtgactaaactcatctactgctctcgaacagttcctgagatc
gagaaggtcattgaggagctgcggaagctgatcgattattacgagaaactgtctggcaac
aaaattgaattcttggctctggctctgagctccaggaagaatctctgcatccacccagag
gttagttctcagaggtttggaaaggaagttgatggaaagtgtcgtagcctgactgcatca
cacatcagaatgcagcactccagcaatcccactgtgcccatctgccagttctatgaggag
tttgatctccatgggaaacaagtgccactaacttctggaatttataacctggatgacttg
aaagcttatgggaagcagaaaggatggtgtccctatttcctggccagatattctattcta
catgcaaacatcattgtgtatagttaccactacctgctggaccccaagatcgcagacctg
gtctccaaggagctgtctcggaaatcagtggtggtatttgatgaggctcacaatattgac
aatgtatgcattgactcaatgagtgtgaacattactcgacgcatgttagaccaatgtcag
aacaacattgaaacaatacaaaaaaccatccaacatataaaggaaacagatgctgccaaa
ctgaaagaagaatacagacaattagtggaggggctgaaagaagctcacattgccagagaa
acagatgtctatttagccaatcctgtattgccagatgaaattctacaagagtctgttcct
ggtaatattcgcacggctgagcattttgttgggtttatgaagcgctttgtggagtatctg
aagtcccgcttacgagtacaccatgtggttgctgagaacccaccctctttcttgaaagat
gtttttgataaagtctgcattgaacgcaaacctctcaggttctgttcagagaggttgcgg
tctttgctgcaaacgctggaaattgccgatctcagcaacttttcaccgattatacttgtc
tcaaactttgctacattggtcagcacttatgccaaaggttttaccatcatcatggaacct
tttgatgacaaaacgccaacaattattaatccaatacttcacttcagctgcatggaccca
tccattgccatcaagcctgtgtttgagcgatttcagtctgtgattatcacctcagggaca
ttgtctccacttgacatgtacccaaagattctcgatttcagacctgttatcatggcaact
tttaccatgaccttgtcaaggacctgcctttgtcccctgattgtgggacgaggcaatgac
caggtgacgatcagctccaagtttgaaacgagagaggatatcgctgtgattcgtaactat
ggtaacctgttgctggagatgtcggccattgtcccagatggaattgtgtctttcttcact
agttaccattacatggagaatatcgtagcctcctggtatgaacagggaattcttgaaaat
attcaacgtaacaaacttatatttattgaaactcaggatgctgcagagaccagtgtggcc
ctggagaaataccaggaggcatgtgagaatggacgaggcgccatcctactgtcagtcgct
agaggaaaggtctccgaggggatagattttgtccatcattacggaagagctgtgattatg
tttggtgttccttatgtctacactcagagcaggattctaaaggcacgtttagaatacatc
cgggatcagttccaaatccgagagaatgatttcctgacttttgatgccatgaggcatgct
gctcaatgtgtaggaagagtcattcgtggaaaaactgattacgggctcatgatttttgca
gacaagcgctttgctcgagctgataagcgggggaagctgcctcgctggattcaggaacac
atcacagacagtaacctcaatctcaccgtggatgaagcagtgcaaatagccaagcacttc
ctgcgacagatggcacagcctttccaacaggaagatcagttgggattgtcactgctctca
ctagatcagctcgaatccgaggagatactaagcagaatccagcagatttctcaccaagtg
tga
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