Hemiscyllium ocellatum (epaulette shark): 132836845
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Entry
132836845 CDS
T09720
Symbol
ddx56
Name
(RefSeq) probable ATP-dependent RNA helicase DDX56
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hoc03009
]
132836845 (ddx56)
Enzymes [BR:
hoc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
132836845 (ddx56)
Ribosome biogenesis [BR:
hoc03009
]
Eukaryotic type
Pre-60S particles
Helicases
132836845 (ddx56)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Motif
Other DBs
NCBI-GeneID:
132836845
NCBI-ProteinID:
XP_060712357
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All DBs
Position
48:12625738..12638243
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AA seq
552 aa
AA seq
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MAAEKLRFHEMGLDERVLQAIASLSWAEPTLIQEKAIPLALEGKDLLARARTGSGKTAAY
AIPIIEHLLNTKKSVCEQAVRALILVPTKELGQQVLQMIRQLTLCCARDVRVADVSGQVD
VSAQRPILMEKPDIVIGTPSRILLHLEQHTLNLSTTLEMLVIDEADLLFSFGFENDLKNL
LGHLPKIYQAFLMSATFNEDVQTLKELVLHNPMILKLKESQLPDSSQLIQYHIKCEEEEK
FLLIYTFLKLSLVRGKTIIFVNSIDRCYRLKLFLEQFSILACVLNSELPVHSRCHIINQF
NRSLYDYIIATDEHILTNLSGSEEQKTKKKQCKKARAKDREYGVSRGVDFYNVSNVINFD
FPLSVESYIHRVGRTARANNQGTALTFVSHTELPLLQNVEDALAGENLDCVLKPYQFRIE
EIEGFRYRCKDAMRSVTKQSIKEARIKEIKQELLNSEKLKTYFEDNPRDFDLLRHDKPLH
PAIVKPHLKNVPDYLIPQPLKRITRPLISKRIRWRRKITGKSTQKNKKPNMKRNPLKHFT
SQGKKQKAKSAS
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggagaagttgaggttccacgagatgggacttgatgagagagttttacaggca
attgcaagcctcagttgggctgaaccaactttgatccaggaaaaagccattcctttggca
ctggagggaaaggatctccttgccagagcacgtacaggatcaggaaaaactgcagcatat
gctatccccatcatagagcatcttcttaacaccaaaaagtcagtctgcgagcaagcagtg
cgagctctcatattggttcccacaaaggaactaggtcaacaagtgctgcagatgatccga
caactcacattgtgttgtgctcgggatgttcgagtggctgatgtttcgggacaggtggat
gtatcagcacaaaggcctatattaatggagaagcctgacattgttattggtacgccttct
cgaattctgctacatttggaacagcacaccctgaacctcagcaccacactggagatgctt
gtcattgatgaggctgatctactcttctcatttggatttgaaaatgatctgaaaaacctg
ctggggcaccttccaaagatttaccaagcattcttgatgtcagccacatttaatgaggat
gttcagacattgaaggaactggtgcttcataacccgatgattctgaagctcaaggagtct
cagcttccggatagctcacagctgatccagtaccacattaaatgcgaggaggaggagaaa
ttccttctgatttacacatttctcaaactctcccttgtccgtggcaagaccataatcttt
gtgaattccattgatagatgctaccggctgaaactattcttggaacaattcagcatattg
gcatgcgtcctaaactcagaattaccggtacactccaggtgtcatatcatcaatcagttc
aatcggagtttgtatgattatatcattgccacagatgaacatattttgacaaatttaagt
ggctcagaggaacaaaagacaaaaaagaaacagtgtaaaaaagcaagagccaaggatcgt
gaatatggggtctccagaggagtggatttttataatgtttcgaatgttattaactttgac
ttcccactctcagtggagtcctatatacatcgtgttggcaggactgcccgtgcgaataac
caggggacggcattgacgtttgtatctcacacagaattgccactactacagaatgtggag
gatgcacttgctggagagaatttggactgtgttttgaaaccatatcagtttcgcattgag
gagattgagggcttccgctatcggtgtaaggatgcaatgcgttcagttacaaaacaatca
atcaaagaggctcgcatcaaggaaatcaaacaggaactgctcaactctgagaaactgaag
acctatttcgaggacaatcctcgagactttgatttgttgcgacatgataaacctctgcat
cctgctattgtgaagccacatttgaagaatgtaccggattacttaattccccaacccctc
aaaagaatcacgaggcccctcatcagtaaaagaataagatggcgaagaaagatcacagga
aaatcaactcagaaaaacaaaaagccaaacatgaagcgtaacccactcaagcatttcacc
tcccaagggaagaagcaaaaggcaaagagtgcgagttaa
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