Hemiscyllium ocellatum (epaulette shark): 132836874
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Entry
132836874 CDS
T09720
Name
(RefSeq) beta-TrCP
KO
K03362
F-box and WD-40 domain protein 1/11
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc04114
Oocyte meiosis
hoc04120
Ubiquitin mediated proteolysis
hoc04218
Cellular senescence
hoc04310
Wnt signaling pathway
hoc04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
132836874
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
132836874
04340 Hedgehog signaling pathway
132836874
09140 Cellular Processes
09143 Cell growth and death
04114 Oocyte meiosis
132836874
04218 Cellular senescence
132836874
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hoc04121
]
132836874
03036 Chromosome and associated proteins [BR:
hoc03036
]
132836874
Ubiquitin system [BR:
hoc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
132836874
Chromosome and associated proteins [BR:
hoc03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
132836874
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_TEP1_C
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-TrCP_D
WD40_MABP1-WDR62_2nd
WDR55
EIF3I
Beta-prop_SCAP
Beta-prop_EML_2
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
F-box-like
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_IP5PC_F
Beta-prop_DCAF12
F-box
WD40_like
NBCH_WD40
Beta-prop_Nup120_160
Beta-prop_VPS8
Beta-prop_DCAF4
Beta-prop_IFT140_1st
WD40_RFWD3
Beta-prop_WDR11_2nd
Beta-prop_NWD2_C
F-box_5
WD40_2
DUF4508
Motif
Other DBs
NCBI-GeneID:
132836874
NCBI-ProteinID:
XP_060712413
LinkDB
All DBs
Position
48:20467206..20500156
Genome browser
AA seq
539 aa
AA seq
DB search
MMDSDSILHDKIVEYMNASGRDDLNDAEPPKKLVLGKNTFHQTKLSNGTPSMIAVKQHTP
SSSYEKQKEQCVKYFDQWTETDQVEFVENLISRMCHYQHGHINSYLKPMLQRDFITVLPA
RGLDHIAENILSFLDACSLCAAELVCKEWYRVISDGMLWKKLMERMVRTDSLWKGLSERR
GWIQYLFKNKPSDGISPPDSFYRSLYPQIIQDIETIESNWRCGHHGLQRIHCHSETSKGV
YCLQYDDQKIISGLRDNTIKIWEKNTLECKNVLTGHTGSVLCLQYDDKVIITGSSDSTVR
VWDVGTGEMLNTLIHHCEAVLHLRFTNGMMVTCSKDRSIAVWDMSTSTDITLRRVLVGHR
AAVNVVDFDDKYIVSASGDRTIKVWNTGSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDN
TIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLIAALDPRSPAGTL
CLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILIWDFLNVPLEQGDGTQSAPRTYTYVSR
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgatggactctgactccattctgcatgacaagatagtggaatacatgaacgcatctgga
cgcgatgaccttaatgatgctgaaccccctaagaaacttgttttgggaaagaacacattt
catcagacaaaactcagcaatgggaccccgagtatgattgcagtgaaacagcatacacct
tcaagcagctatgagaaacagaaagaacagtgtgtgaaatactttgaccagtggacagaa
actgatcaggtggaatttgtggagaacctgatttcccgaatgtgtcactatcagcacggt
cacatcaattcttacctgaaacccatgctgcagagggacttcatcactgtgctcccagcc
cgtggcctggatcacatcgcggagaacatcctgtcattcctggatgcctgctccctgtgt
gcagccgagctggtctgtaaggaatggtaccgggtcatctccgatggcatgctgtggaag
aagctgatggagcggatggtgcgcacggattccctctggaaggggctgtcagagaggagg
ggatggatccagtatctattcaaaaacaagccctccgatgggatctcccctccagactcc
ttctacagatcgctctatccccagattatacaggacattgagaccattgaatccaactgg
aggtgtggtcaccatggattacaacgcatccactgccacagtgaaaccagcaaaggtgtt
tattgtttacagtacgatgatcagaaaattatcagcggtttacgagacaacactatcaag
atatgggagaagaacacactggaatgtaagaatgttctgacagggcataccggctccgta
ctgtgtctgcagtacgacgacaaagtgattatcactggctcctcagactccacagtcaga
gtgtgggatgttggtacgggtgagatgttaaacacactgatccatcactgtgaggcagtg
ctgcatctgcgtttcaccaatgggatgatggtcacctgctccaaggatcgatccattgcc
gtgtgggatatgagcacgtccacggacattaccttacgccgcgtcctggttggtcacagg
gcagctgtgaacgttgtcgattttgacgataagtacattgtatctgcttcaggcgatcgc
acaatcaaagtgtggaacactggctcctgtgagtttgtccgaacactgaatggccataag
cgagggattgcctgcctgcagtacagggacaggctggtggtcagtggatcctctgataac
acaatccggttgtgggacattgagtgtggagcgtgtctgcgagttcttgagggtcatgag
gaactcgtacggtgtattcgttttgacaacaagcgaatagttagtggagcctatgacggg
aagataaaagtctgggacctaattgctgctttagaccctcgctccccagctggcacactc
tgtctgcgaacgttggtggagcattccgggagagtttttcgactgcagtttgatgagttc
cagattgtgagtagttcacatgacgacaccattttgatctgggattttctcaatgtgccc
ttggaacaaggtgatggaacacagtcagcaccccgcacatacacctatgtttccagatag
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