Hemiscyllium ocellatum (epaulette shark): 132837057
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Entry
132837057 CDS
T09720
Symbol
usp39
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132837057 (usp39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hoc03041
]
132837057 (usp39)
Spliceosome [BR:
hoc03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
132837057 (usp39)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
132837057
NCBI-ProteinID:
XP_060712717
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Position
48:complement(4461797..4499664)
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AA seq
500 aa
AA seq
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MAAVKLEAESGDEGDWEPASKIARLHPQEEEDDRSRHCPYLDTINRSVLDFDFEKLCSVS
LSHINVYACLVCGKYFQGRGLKSYANIHSVQVGHHVFLNLHTLKFYCLPDNYEIIDSSLE
DITYVLKPTFTKQHIANLDKQSKLSRAYDGTTYLPGIVGLNNIKANDYANVVLQALSNVP
PLRNYFLEEENYRDIKRPPGDIMFLLVQRFGELMRKLRNPRNFKAHVSPHEMLQAVVLCS
KKRFQITKQGDAVDFLSWFLNALHMALGGNKKKKTIINSVFQGSMRIFTKKLPPPDLTPE
EKEQLLEMEEFKETMTESTFLYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAKFNGITEK
EYKTYKENFLKRFQLTKLPPYLIFYIKRFTKNNFFIEKNPTIVNFPITNVDLREYLSEEV
QAAHKQTTYDLIGNVVHDGKPGEGAYRVHVLHHGTGKWYELQDLQVTDILPQMITLSEAY
IQIWKRREDGDESLSSQKGA
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggtgaagctggaggcggagagcggggacgagggggactgggagccagcctcc
aagatcgcgaggttacaccctcaggaggaggaggatgaccgaagcaggcattgtccctac
ctggacactatcaatcggagtgtgttggattttgactttgaaaagctgtgctccgtctcc
ctttcccacatcaacgtgtatgcttgcctggtgtgtggcaaatacttccaaggccgaggc
ctgaagtcctacgccaacattcacagtgttcaggtcgggcaccacgtctttctgaatctg
cacacgctgaagttctactgcctcccagacaactatgaaatcattgactcctcccttgaa
gatatcacgtacgtactgaagccaacgttcaccaagcagcatatcgcgaacctggacaaa
cagtcaaagctgtcgcgggcttacgacgggaccacctacctgccaggaattgtgggactg
aacaacatcaaggccaatgactacgccaacgtggtgctacaggctctgtcgaatgtcccc
ccgctgcggaactattttctggaggaggagaactacagggatatcaagcgtccgccaggg
gacatcatgtttctgctggtgcagagattcggcgagttgatgaggaagctgcggaacccc
cgcaacttcaaggctcacgtctctccacatgagatgttacaggcggtggtgctgtgcagc
aagaaacggttccagatcaccaagcaaggtgacgccgttgactttctgtcgtggttcctg
aacgcactccatatggcgcttggagggaacaagaagaaaaagaccattatcaacagcgta
tttcagggatccatgaggatctttacaaagaagttacctccgccagacctgacaccggag
gagaaagaacagctcctggaaatggaggagttcaaggaaacgatgaccgagtccaccttc
ttatacctgaccctcgacctgcccacagccccgctctacaaggacgagaaggagcagctg
atcattccgcaggtccccctcttcaacatcctggccaagttcaacggcatcacagaaaag
gagtataaaacctacaaggagaacttcctgaagaggttccagttgacaaagctcccgcct
tacctcatcttctacatcaagcgtttcacgaaaaacaatttcttcattgagaagaacccc
accatcgtgaacttcccgatcacgaatgttgacctgagagagtacctctccgaggaagtg
caggccgctcacaaacagaccacctacgacttgattggaaacgtggtgcacgatgggaag
ccgggcgagggagcctatcgggtccacgtgctgcatcacggcacagggaagtggtatgag
ctgcaggatttacaggtcactgacatcctgccacagatgatcaccctatcggaggcttac
atacagatatggaaaagacgtgaggacggtgatgaaagtctgtccagtcagaaaggagca
tga
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