Hoeflea sp. IMCC20628: IMCC20628_00017
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Entry
IMCC20628_00017 CDS
T03926
Name
(GenBank) Bacterial extracellular solute-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
hoe
Hoeflea sp. IMCC20628
Pathway
hoe02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hoe00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
IMCC20628_00017
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hoe02000
]
IMCC20628_00017
Transporters [BR:
hoe02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
IMCC20628_00017
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_6
Motif
Other DBs
NCBI-ProteinID:
AKH98753
LinkDB
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Position
16059..17294
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AA seq
411 aa
AA seq
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MSSSPEILSEPASPAIVQRRVLRVRGTAVTLLEQVREQAVADLQFDIEYESLDFLTCQHK
AAMDPENYDVYEQCFHNLDIVWYWGALQPIDTQRIAEWDRIGDLAKTGGISKYMWPGYGD
APVRKLYVQPDGMLGQQQMRHISMLPTAHNVDSFGYDTRVFGDLGPEGASWSWLLDPRAK
GRIALVDEPAIGLFDAALAAEATGDLSFEDIGNMTIDEIDQLMGLLDLLRQQGFFCASWV
NAEDAEALLREDRVSVQSMWAPSYGNLGAMSDYFVEASPREGYRAWHGGGSLSRHLSGAK
LDMAYEYLNWWLTGPAGAVMARQGYYMTVPERVRESLSPEEWEYWYEGAPAGCDLSGPSG
NKVVKAGARRPGGSYRERISRISVWNTVMDEYNYAARAWNRFIRSVNEGAA
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcagccccgaaatcctgtcagaacccgcatctccggcaattgtgcaacggcgg
gtgctgagggtgcgggggacagccgtgaccttgcttgagcaggtgcgcgagcaggcggtt
gcggatttgcagttcgacattgaatatgagtcgctcgactttctgacctgccagcacaag
gcggcgatggaccctgaaaattacgatgtctatgagcagtgtttccacaatctggacatc
gtctggtactggggtgccttgcaaccgatcgacacccagcggatcgccgaatgggacagg
atcggtgatctggccaagaccggcggcatctccaaatacatgtggccgggctacggcgac
gcaccggtgcgcaagctctatgtgcaaccggacggcatgctgggccagcagcagatgcgc
cacatcagcatgttgcccaccgcgcacaatgtggattccttcggttatgacacccgcgtc
ttcggcgacctcgggcccgagggcgcgagttggtcgtggttgcttgatccgcgggcaaag
ggtcgcatcgcgctggtggacgaaccggctattggccttttcgatgcggcgctggccgcc
gaagctacgggagacctgagcttcgaggatatcggcaacatgacgatcgatgagattgat
cagctgatggggctgctggacctgctgcggcagcaggggttcttctgcgcttcctgggtc
aatgccgaggatgcggaggcgcttttgcgcgaagaccgggtttcggtgcaaagcatgtgg
gcgccttcctacgggaaccttggcgcgatgtcggactatttcgtcgaggcgtcaccgcgc
gaaggctacagggcgtggcatggtggcgggtctttgtcgcgccatttgtccggggccaag
ctggacatggcctatgagtatctcaactggtggctgacaggcccggcaggcgcggtgatg
gcgcggcagggctactacatgaccgtccctgaacgcgtgcgggagagcctttcgccggag
gaatgggagtattggtacgaaggcgcgccagcaggctgcgacctgagcgggccgtcaggc
aataaggtggtaaaggcaggcgcccggcgcccgggcggatcttaccgcgaacggatcagt
cgcatctccgtgtggaacactgtcatggatgaatataactacgcggcgcgggcctggaac
cggttcatacgctcggtgaacgagggtgccgcatga
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