Hoeflea sp. IMCC20628: IMCC20628_00024
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Entry
IMCC20628_00024 CDS
T03926
Name
(GenBank) spermidine/putrescine-binding periplasmic protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
hoe
Hoeflea sp. IMCC20628
Pathway
hoe02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hoe00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
IMCC20628_00024
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hoe02000
]
IMCC20628_00024
Transporters [BR:
hoe02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
IMCC20628_00024
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_6
TAT_signal
Motif
Other DBs
NCBI-ProteinID:
AKH98760
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Position
22891..24114
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AA seq
407 aa
AA seq
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MTTSNFSRRRFLQTTAGSAALAAGGMPFFGGQQAFAAGLAEQQLRTVGLSVTVQDRILND
FKVKSGIGSVSGKADIFPNTQTEILSGSDSYDCWEIIGERLAAMVATDKLAPAPASSIPN
WAGIRETFTKPSDRWDLNRQIVGQIWEDESQQRLNMIPTVFNYDSIGYRPDLVDAEEAST
WAALFDPKFKGKTGLNVDPLIAFGQAVMAMNTLGLLEVANPGNPDAAAIEEAAKFLISKK
KEGQFRALWGDFGELVNLLASGEMVIADAWQPAVMAVKAQGVECSYATMKEGYRGWAIGV
APLKTSPNLEAVAAYADYWLSGPPAVAVSEQGYYSPTTNVKEAMDPDKYAFWYEGAPWVG
EAERGIKEGDLRDGGSLETRAANVAYWHQWPDEYDLLIQKWDEFLTA
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgactacctcaaatttctcaaggcggcgatttttgcagaccactgcaggcagcgctgca
ttggcagctggtggcatgcctttcttcggcgggcagcaggcatttgctgcagggctcgcg
gaacagcaactgcgcactgtcggtctttcggtgactgttcaggatcgtatcctcaatgat
ttcaaagtgaagtcaggcatcggatctgtttcgggcaaagccgacattttccccaacaca
cagaccgaaatcctgtcgggctctgactcttatgattgctgggaaatcatcggtgaacgt
cttgccgcaatggtcgcgactgacaagctggctccggcgcctgcatccagtatcccgaat
tgggccggtattcgtgaaaccttcaccaagccgtccgatcgctgggacctgaaccggcag
atcgtcggccagatctgggaagacgaaagccagcagcgcctgaacatgattccgacggtc
ttcaactatgattccatcggctaccggcctgacctcgtcgacgctgaagaagcctcgacc
tgggctgcgctgttcgatcccaagttcaagggcaagaccggcctcaacgtcgatccgctg
atcgcgttcggtcaggcagtcatggcaatgaacacgcttggcctgcttgaagtcgccaac
cctggcaatccggacgcagctgcgatcgaggaagccgcgaaattcctgatttcgaagaag
aaagaaggccagttccgtgccctttggggtgacttcggcgagctggtgaaccttctggct
tccggcgaaatggtcatcgccgatgcatggcagcctgctgtcatggcggtcaaggcacag
ggcgtcgaatgctcctatgcgaccatgaaagagggctatcgcggttgggcgatcggtgtt
gcaccgctcaagacctcgccgaacctggaagcagtcgcagcctatgccgattactggctg
tcgggcccgcccgctgttgccgtgtcggagcagggctactattcgcccacgaccaacgtc
aaggaagcgatggatcccgacaaatacgccttctggtacgaaggtgcgccttgggtcggc
gaagccgaacgcggcatcaaggaaggcgatctgcgagatggcggttcgctcgaaacccgt
gcggccaacgtcgcttactggcaccagtggccagatgagtatgatctgctgatccagaag
tgggacgagttcctgaccgcctga
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