Hoeflea sp. IMCC20628: IMCC20628_00078
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Entry
IMCC20628_00078 CDS
T03926
Name
(GenBank) transcriptional regulator, RpiR family
KO
K19337
RpiR family transcriptional regulator, carbohydrate utilization regulator
Organism
hoe
Hoeflea sp. IMCC20628
Brite
KEGG Orthology (KO) [BR:
hoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hoe03000
]
IMCC20628_00078
Transcription factors [BR:
hoe03000
]
Prokaryotic type
Helix-turn-helix
Other families
IMCC20628_00078
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Gene cluster
GFIT
Motif
Pfam:
HTH_6
SIS
SIS_2
HTH_AsnC-type
LacI
HTH_24
MarR
Motif
Other DBs
NCBI-ProteinID:
AKH98814
UniProt:
A0A0F7PH05
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Position
complement(70051..71019)
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AA seq
322 aa
AA seq
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MVDIEVTKPTAKSSHGTAAPDDTGNEGYAKAIPDILSQIKDSYAELRPAERRVADVVLAD
VTFSVDASNAEIARKADVSEPTVTRFCRAIGCDGVRDFKLKLAQSVVVGRLYLSPNPPPE
PSENGSPLWNVVFGEARNALNAVERSIDPKDILKAAELVAIAPQVLVFGLGGSSTALALE
TQNRLFRYGVIVSSYSDPYVMKMTASTLKPGDLVIAISGTGRTREVVEATTLAKHYRANA
IAITVPDSDLAAVVDLALTVDVPEFQDVLKPTASRYAFLAIIDLVSTAVGYRLEPDARET
LRRIKYTVLNHRKGKVLEPLGD
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggtggatatcgaagtgaccaaaccaacggcaaaatcgtcacacggcaccgctgcgccg
gacgacaccggcaatgaaggctacgccaaagcgatccccgacatcctctcccagatcaag
gattcctacgcggaattgcgtccggcggagcgtcgtgttgcggatgtggtgctcgccgat
gtgacgttttctgttgatgcatccaacgccgaaatcgccaggaaggccgatgtcagcgaa
ccgaccgttacccgtttctgtcgcgccatcggctgcgacggcgtacgcgatttcaagctc
aagctggcgcagagcgtcgtggtggggcggctctacctctcccccaacccgcctcccgag
cccagcgagaacggatctccgctatggaacgttgtgtttggcgaggctcgaaacgcgctc
aatgcggtcgaacgcagcatcgatccgaaagacatcctgaaagcagccgaactggtagcg
attgcgccgcaggtgctggtcttcggcctcggcgggagttcgacggcgctggcgctggaa
acccagaaccggctgttccgctacggcgtcatcgtctcatcctattcagacccctatgtc
atgaaaatgaccgcttcgaccctgaaacccggtgatctggtgatcgcgatctcgggcacc
ggacgcacccgcgaagtggtggaagcgacgacgcttgccaaacattaccgcgccaatgcg
attgccatcaccgtcccggacagtgatctggcggcggttgtcgacctggcgctcaccgtc
gacgtgccggaattccaggacgtgttgaaaccgactgcctcgcgctacgctttcctggcc
atcatcgacctggtttccaccgctgtcggttacaggctcgagccggatgcccgtgaaacc
ttgcggcggatcaaatacacggtgctcaatcatcgcaagggcaaggtgttggagccgttg
ggcgactga
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