Hoeflea sp. IMCC20628: IMCC20628_00942
Help
Entry
IMCC20628_00942 CDS
T03926
Name
(GenBank) Exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
hoe
Hoeflea sp. IMCC20628
Pathway
hoe03030
DNA replication
hoe03430
Mismatch repair
hoe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hoe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
IMCC20628_00942
03430 Mismatch repair
IMCC20628_00942
03440 Homologous recombination
IMCC20628_00942
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hoe03032
]
IMCC20628_00942
03400 DNA repair and recombination proteins [BR:
hoe03400
]
IMCC20628_00942
Enzymes [BR:
hoe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
IMCC20628_00942
DNA replication proteins [BR:
hoe03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
IMCC20628_00942
DNA repair and recombination proteins [BR:
hoe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
IMCC20628_00942
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AKH99660
LinkDB
All DBs
Position
996162..996746
Genome browser
AA seq
194 aa
AA seq
DB search
MTSPLPDGEFQFIALDVETACGDSASICQIGIACVGYDESIRTWSTYVDPQMPFAPFNID
LHGIGPNTVRNAGNFAQVWPDMLPLLSRHPMVQHSRFDEHAINAACKAHGLLRPCLTWLD
SVTIARAAWPELKGNGGHGLANLKQVLKLDFHHHDAGEDARAAAMVVLHAQAASPELAAK
HALRFKPVQLSLPF
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
gtgacgtcgcccctgccagatggggaattccagttcatcgcgctggatgtcgaaaccgca
tgtggtgacagcgcaagcatctgccagatcgggattgcctgtgtcgggtatgatgagagc
attcgcacatggtctacatatgttgacccgcaaatgccctttgcgccgtttaacatcgat
ctgcacggaatcggtcctaataccgtgcgaaacgcgggaaactttgcgcaggtctggccc
gatatgctgccgttgctttctcgtcacccgatggtgcagcacagcaggtttgatgaacac
gcaatcaatgccgcatgcaaagcgcacggcctgctgcgcccatgcctgacgtggctcgac
agcgtgactatcgcgcgggcggcatggcccgagctaaaaggcaacggcggccacggtctg
gccaacctgaaacaggtgctgaaactcgacttccaccatcacgacgcaggcgaagacgcc
cgcgcagcagcgatggtcgtgctgcatgcgcaggccgcgtcgcctgaattggcggcgaag
catgcgctgcggtttaaacccgtgcaattgtcgcttcccttttag
DBGET
integrated database retrieval system
