Hoeflea sp. IMCC20628: IMCC20628_01456
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Entry
IMCC20628_01456 CDS
T03926
Name
(GenBank) hypothetical protein
KO
K21470
L,D-transpeptidase YcbB
Organism
hoe
Hoeflea sp. IMCC20628
Brite
KEGG Orthology (KO) [BR:
hoe00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hoe01002
]
IMCC20628_01456
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hoe01011
]
IMCC20628_01456
Peptidases and inhibitors [BR:
hoe01002
]
Cysteine peptidases
Family C82
IMCC20628_01456
Peptidoglycan biosynthesis and degradation proteins [BR:
hoe01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
IMCC20628_01456
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
PG_binding_3
Motif
Other DBs
NCBI-ProteinID:
AKI00173
UniProt:
A0A0F7PHA8
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All DBs
Position
1526593..1528473
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AA seq
626 aa
AA seq
DB search
MNFKSRAGVALIAITIGFTGVIAPTPPAQAQGLLDLLFKTPAQRQREKLSRQRARQDAVE
VARPPKPVARISGPSYRTYKPDTLVKVNFTEIADPVVTSAIGDMVLPPLGIDTFSEGRAA
FADLSLRALPETAKAIVEYYSTHPAYIWVAGTAPTDRANAVIEVLKNADAVGLSADDYKV
DVPADGFDITRGAERQKELMAFEMELSVAVADYILDATRGRVDPNRISGYHDFKRKSPGL
VEQIEALATAADPAEALLGHNPHGAHFEALKAELKRLQDLDDGEHIAIAEDVLLKPGQSN
PELANVIAAIALKGSDALKLDNALVLASYAGKPGYDDELVTLVKGFQKEAGLKPDGVVGP
ATRRALVGITNSDKIEKVRLAMERSRWLPGVLAARRVFINQPAYTATYFNDDKAELSMRV
VVGSKSNQTNFFDDEIELVEFNPYWGVPQSIIINEMLPKLRSDPSYLDRLGYEVTAGGRA
VSSSSVNWNAVGKGSGIGVRQPPSNGNALGELKILFPNSHAIYMHDTPSKSLFDRDTRAL
SHGCIRLKDPRAMAAKVLGTSVADIGSYIAGGRNQQVNLKQKIPVHVAYFTAWPDDAGVV
NYYADVYKRDDYLRKAIAETDKARTS
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgaatttcaagagtcgagcaggcgtggcgctgatcgccattacgattggttttaccggt
gtgatcgcgcccacaccgcctgcgcaagcgcaaggccttctggatctccttttcaaaact
ccggctcagcgacaacgcgaaaagctttcccggcaacgggcgcggcaggacgcagtggaa
gtggcccggccaccaaagcccgtcgctcgcatcagcggaccgagctatcgcacctacaag
ccggacacattggttaaagtgaatttcaccgagatcgccgatcccgtggtgaccagcgca
ataggcgacatggtgcttccgcccctgggaatcgacacattttctgaaggccgtgcagct
ttcgccgatttgtcgctgcgagccctgccggaaacagccaaggcgatcgtcgagtattat
tcgacccatcctgcctatatctgggttgccggaaccgcgccgaccgatcgtgccaacgcc
gtgatcgaggtgctcaaaaacgctgatgctgttggcctgtcagcggatgactacaaggtt
gacgtgcccgcggacggctttgacatcacccgcggcgcggaacgtcagaaggaactgatg
gctttcgagatggagctttcggttgcagttgccgattacatccttgatgcaacacgcgga
cgggtcgatcccaaccggatctcgggatatcatgatttcaagcgcaagagccccggtctg
gtggagcagatcgaggcgctggccacggcagccgatccggctgaagcgttgctgggacat
aacccgcatggcgcccatttcgaggcattgaaagccgaactgaagcgcttgcaggatctt
gatgatggcgaacacattgccattgcggaagacgtattgctcaagccggggcaatccaat
ccggaacttgccaatgtgattgcggcaatcgcgctcaagggcagcgatgcgctcaagctc
gacaacgcgctggtgctggcgagttatgcgggcaagccgggctatgatgacgaactcgtc
accctggtgaaggggtttcagaaagaagccggccttaaacctgatggcgttgtcggtcct
gccacacggcgggcgcttgtcggcatcaccaattccgacaagatcgagaaggttcgactg
gcgatggaacggtcgcgctggttgcctggcgttctggcggcgcggcgcgtgttcatcaat
caaccggcctacaccgccacctatttcaatgacgacaaggccgaactctccatgcgggtc
gtggtcggctcaaaatccaaccagaccaatttcttcgatgacgagatcgagctggtcgag
ttcaacccctattggggcgtgccgcagtcgatcatcatcaacgagatgctgccaaagctc
cgttccgacccgtcctatctggaccggcttggctatgaggtgactgcgggcggccgggca
gtgtcctcgagttcggtcaactggaatgccgtcggcaagggcagcggtatcggcgtgcgc
cagccgccgagcaatggtaatgcgctgggtgaactgaagatcctgttccccaacagccac
gccatctacatgcatgacacgccgtcaaaatccctcttcgaccgcgacactcgggcgctg
agccatggttgcataaggctcaaggacccgcgggcgatggcagccaaggtgctgggtacg
tcggttgccgacatcggcagctacattgctggtgggcggaaccagcaagtcaacctgaag
cagaagatcccggttcatgtcgcctatttcaccgcctggcccgatgatgccggcgtggtc
aactattacgctgacgtctacaagcgcgatgactatttgcgtaaggcgattgccgagacc
gacaaggcgcggacgtcctga
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