Hoeflea sp. IMCC20628: IMCC20628_01504
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Entry
IMCC20628_01504 CDS
T03926
Name
(GenBank) DNA-binding protein with HTH domain
KO
K18098
LuxR family transcriptional regulator, quorum-sensing system regulator BjaR1
Organism
hoe
Hoeflea sp. IMCC20628
Pathway
hoe02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hoe00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
IMCC20628_01504
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hoe03000
]
IMCC20628_01504
Transcription factors [BR:
hoe03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
IMCC20628_01504
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Autoind_bind
GerE
HTH_23
Sigma70_r4_2
Sigma70_r4
HTH_28
Ndr
Phage_terminase
Motif
Other DBs
NCBI-ProteinID:
AKI00221
UniProt:
A0A0F7PJ75
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Position
complement(1577003..1577761)
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AA seq
252 aa
AA seq
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MSAQESAVFEFIERIDKHPSMDALLDDLLQVSNAFGFTHMIYTGLPVGNAPIAPLVKSNR
FPTELWNRYISEDYSKTDPVCQQMLSTMMPFAWSEVEPRFAEREGAARVIGESADHGMSD
GYIVPVFSRDEWLSAVSFGGPRRLELTARERGAINLMAIYASSAIERQQNRQPSSRGKLT
FREREVLLWTSAGKSCWDVSVILGVSEQTVRFHTAQIRHKLNASNTTHAVARALQQGEIT
LDQLAESLGDMH
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcacaggaatccgcagttttcgagtttatcgagcgaattgacaagcatccttca
atggatgccttgctggacgacctgttgcaggtttccaacgccttcggcttcacgcacatg
atttataccggccttcccgtcggcaacgcgcccatagcccctttggtcaagtccaaccgg
ttcccaacagaactgtggaacaggtacatttcagaggactattccaagaccgacccggtt
tgccagcagatgttgtcgacaatgatgcctttcgcctggagtgaagtggaaccgcgtttc
gccgaaagggaaggtgctgcacgcgttatcggtgaatccgcagaccacggcatgtccgat
ggttacatcgtgccggttttttcgcgcgatgaatggctgtccgccgtctcctttggcggg
ccgcggaggctggaattgaccgccagggagcgcggcgccatcaatctgatggcgatttac
gcatcctcggcaatcgagcggcagcaaaacaggcaaccctcctcgcgcggaaaattgacc
ttccgcgaaagagaagtgctgttgtggacctcagcgggaaaatcctgctgggatgtgtcg
gtcattctgggtgtcagcgaacagaccgtgcggtttcacaccgcccagatccgtcacaaa
ctcaacgcctccaacaccacccatgccgtggcgcgggctttgcagcagggcgagatcacc
ctcgatcaactggcggaatcgctaggcgacatgcactga
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