Hoeflea sp. IMCC20628: IMCC20628_01553
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Entry
IMCC20628_01553 CDS
T03926
Name
(GenBank) apolipoprotein A1/A4/E domain-containing protein
Organism
hoe
Hoeflea sp. IMCC20628
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Apolipoprotein
ApoLp-III
Baculo_PEP_C
Motif
Other DBs
NCBI-ProteinID:
AKI00269
UniProt:
A0A0F7PM82
LinkDB
All DBs
Position
complement(1626646..1631901)
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AA seq
1751 aa
AA seq
DB search
MSKTPADKSIDEQTFEALEDALNIDLDDDDLDVLDDISIEELEDKVSSAARELKNAGQKP
TAANVSAQPDPGQSTAPRAPTPPFTPVGPLAPANDDGRKTTAGLLRALDIRSSRGAIRNA
TIISVLWTFGVLGLANLLYGPEIWQIRSIAEILAIPAAIGFLVAILVPVLVFYAFSIMMA
RAREMRSAARSMAEVALRLAEPENVAGDRILTVGQAVRREVSAMNEGIERTIARASELET
LVHSEVNALERSYSDNELRVRGLVQELGSERDAIVGHAERIRASISGAHEQLKEELTTAS
EEISSRISTSGEAFAQLMETRAASLQERTVETSRQLETLLDGRTDALVTALKTSGGDLTD
EFDTRLEMLNVQLNQRGKALLSEFETRASTLDANTEKLNAALGERARQLNETLIARTRDI
SESLGVGQQAITSGLEETLAALNSSLDEKGASFRQSLKTSADDAVMDLDLRSGFFEEKLE
SSISRLTAAFDERVGEFTSAFDSRAGSLDGKLSDSLSRINETLNGGTNAMDGILSASLER
IGATLSDRSQALEAALGTGVERLESTAETTANRIETNLAQRAQALEAALGSGVERLESST
ATAASRIETTLAQRTEAMETAMGTGAERMESSSSMASARIEATLAQRAEALETTLEAGME
RLESSTSNAATRIDETLSQRATNLEAALSAGAGRIDTSLSEGTNEIVSGISGKVTDLEFA
LAAGAERIDTSMNERSAALFGSLSENAESLDRKLGERAEELDRKLGERVESFGTTVNEAA
DVLDGRLAARASAIQSGLTGATEQLSATLDVEGQRFAELATSASDRVDATFAKGAGRIDE
RLTTMNNMLGIGLDSVSKTIEGKATGLAAKLREAVANAAVDLDGEALKAGETLGTISSGF
ASNMDEQARNFARTLDEHVEERTANLAAHAETIAGRISAGAADLGSEAARISDLVERVGE
TVGNQANTIATTLDATEARFAAQAAALTSRLESETGAISSRIGKTASSLVSALDEKAGAI
DARLAASGESLLARTGSLGEALEQKASTIVKRLVEAEQAMDTRATAVHSTLDERTRELNS
MLASRSAELSRVIDEQARPLVDRYAASGEEFANRLTEVTQNSTDRLRAENAALINAITNR
TSETLSAIESVNQSLSGNVGSLLERLGASNQDISEVVERAAATLGAANAQLSETTGEISS
STEKAAELLSGSARLLDGKVERLTDISSRTLNQVGAIAGRFDDHSKVLASASDLLGAAQS
NLASTLEERREALQSLSVGLVSRSEQIETTMHSLEDIVLKAFSGADELSKRAAVRLEGGL
RNAAESATKLLDETEGKAHSVAGVMRESIREAVEDTDKLLSEAEARAQSAANVMAGNMRG
AVEDTDKLLRATEARAQSAASVMTGNMRGAVEDTDKLLGEAEARAQSAASLLTGNMRGAI
EDADKLMRGSETRAQTAAGLMRETVREAIEDAITRFSGATDEIRKSAADIKRELDDTRSE
LKRGAFDLPEETRESAAAMRRAVADQIKALQELSQIVGQSSQRIEVSEPAPRPAPRAAVQ
QAAPQRQPAPAAPAPAPRIEVPAQRVPLRGSFETAGAAPAKSEGWVSDLLRAASREEQAP
APAPVAQKKPERNPRHVVESLNSLSVDIARAIDHDASVDLWRRYQRGERDVFTRRLYTLK
GQQTFDEIKNKYGREPEFRAAVDRYIADFEKLLSDVARNDRDNMMTQTYLTSDTGKVYTM
LAHASGRFDRD
NT seq
5256 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaacaccagcggacaagagcatagacgagcagacattcgaggcgcttgaagac
gccttgaatatcgatctcgacgacgatgacctggatgtgcttgacgacatttcgatcgaa
gagctggaagacaaggtgtccagcgccgctcgagaactcaagaacgccggtcaaaagccc
actgccgcaaatgtgtctgcccagccagatccaggccaaagcaccgcaccgcgcgcaccg
acgccgccgttcaccccggttggaccattggcgcccgccaatgatgatggacgcaagacc
accgccggtcttctgcgcgcgctggatatccgctcaagccgtggagccatacgcaacgcg
acgattatctccgtgctgtggacctttggcgtcctcggactggcgaatctgttgtacgga
cccgagatctggcagattcgttcgattgccgaaattctggccatacccgcggccattggt
ttcctggtggccattctggtccccgttctggttttctatgccttttcaatcatgatggcc
cgcgcacgcgaaatgcgctccgccgcacggtccatggccgaagtggcgctgcgccttgcc
gaacccgaaaacgtcgccggcgacaggatcctgaccgtcggccaggcagtccggcgtgaa
gtctcggccatgaacgaggggattgagcgcaccattgcccgcgcttccgaactcgaaacc
ctggtgcattcggaagtcaatgcactggaacgaagctattcagacaacgaattgcgcgtc
cgcggcctggtgcaggaactgggatccgaacgcgacgcaattgtcggccatgccgagcgt
attcgcgcctcgatctccggcgcccatgaacagctcaaggaagaattgacaaccgccagc
gaagaaatttcgagccggatctcgacctcgggtgaagcattcgcgcaactgatggaaacg
cgtgctgcgagcctgcaggaacgcaccgtcgaaaccagccgtcagctggaaactttgctc
gatggccgcaccgatgcactggtgacggcgctcaagacctccggcggcgatttgaccgac
gagttcgacacaaggctggaaatgctcaatgtccagctcaaccagcgcggcaaggcgctg
ttgtccgagtttgaaacccgcgcctcgacgcttgacgccaacaccgaaaaactcaacgcg
gcactcggtgaacgcgcccgccagctcaatgaaacactgatcgcccgcacccgggacatc
tccgagagccttggcgtcggtcagcaagcaattacgtcgggtcttgaagagacactcgca
gcgctcaactcgtctctggacgagaaaggcgcatcattccgccagtcgctgaaaaccagc
gccgatgacgcagtcatggatctcgatctccgctccggcttctttgaagagaagcttgaa
tcatcgatcagccgcctgaccgccgccttcgatgaacgggtcggcgaattcacttccgcg
ttcgacagccgtgccggcagcctcgacggcaagctttctgacagtctgtctcggatcaac
gagacactgaatggcggcacaaatgccatggacggcattctgtcagccagcctcgagcgg
attggcgccacactctcggatcgcagccaggcactggaagctgcgctgggtacgggtgtc
gagcggttggaatcgaccgcagaaacgactgccaaccgcatcgagaccaacctggcgcaa
cgcgcccaggcactggaagccgcacttggttcgggtgtcgagcggttggaatcgtccacc
gccacagccgcctcccgtatcgagaccaccttggcacagcgtaccgaggcgatggaaact
gcaatgggtacaggcgcggagcggatggaatcctcttccagcatggcttcggcacggatc
gaagccaccttggcgcagcgcgccgaggcactggagacaactctggaagcaggcatggag
cggctcgaatcctccacatccaatgccgccacgcggatcgacgaaaccctgtcgcagcgc
gctaccaatctggaagctgccttgtccgccggcgcaggccgcatcgatacaagcctctcg
gagggaaccaacgagatcgtgtccggcatttccggcaaggtcaccgatctggagttcgcg
cttgccgcaggtgcggaacggatcgacaccagcatgaacgagcggtctgctgctctgttc
gggtccctctcggaaaacgctgaatcgctggatcgcaaacttggcgaacgcgccgaggaa
ctcgatcgcaagctcggcgaacgcgtggaatcattcggcacgacagtcaacgaagcagcc
gacgtgctcgacggtcgccttgccgcacgggcttccgcaatccagtccggcctcacaggt
gccacagagcagctttcggcaacactggacgtcgaaggccaacgcttcgccgaactggcg
acatccgcctccgatcgtgtcgacgccactttcgccaaaggcgctggccgtatcgacgag
cgcctgaccacaatgaacaacatgctcgggatcgggcttgattcggtttccaagacaatt
gaaggcaaggcaaccggcctcgccgccaagttgcgggaagccgtcgccaacgctgccgtc
gacctggacggagaagcgctcaaggcgggtgaaacgttgggaaccatcagttccggcttt
gccagcaatatggatgagcaggcgcgcaattttgcccgtactctcgatgaacatgtcgaa
gaacgaaccgccaatctggcagcccacgccgaaaccattgccggccgcatttccgcaggc
gccgccgatcttggcagtgaagccgcccggatcagcgatctggtggagcgcgtcggcgaa
accgttggaaatcaggcgaacactatcgccaccacgctggatgcaaccgaagcccggttt
gccgcacaggccgcagcacttacgtcccggctggaatccgagactggcgcaatctcgagc
cgtatcggtaaaaccgccagcagtcttgtatccgcgctcgacgaaaaggccggtgccatc
gacgcccgcctggctgcgtccggagaaagcctcctcgcccgcaccggttcgcttggtgag
gcgcttgagcagaaggcatcgaccatcgtcaaacgactggttgaagccgaacaggccatg
gacacccgcgccacggcggttcattccaccctggatgagcggacccgcgaactcaattcg
atgctggccagccgctccgccgagctttctcgtgtcattgacgaacaggcccgtccactg
gtcgaccgttacgcagccagcggcgaagaattcgccaaccgcctgaccgaggtcacccag
aattcgactgatcgcctccgcgccgaaaacgcggcgctgatcaacgccatcaccaaccgc
accagcgaaacgctgtctgccatcgagtccgtcaatcagagcctgagcggcaatgtcggc
agcctgctcgaacgccttggtgccagcaaccaggacatttctgaagtcgtggagagggct
gcagcaactcttggcgcagccaatgcccagctttcagagacgacgggcgagatttcctcc
tccaccgaaaaggccgcggaactgctctccggctccgcccggcttctcgacggcaaggtc
gaacggctcaccgacatttccagccggacgctcaaccaggtcggcgccatcgccggacgc
ttcgacgaccattccaaggtgcttgcgtccgcatcggacctccttggtgcagcgcagtcc
aacctcgcctccacgcttgaggagcgccgggaagccctgcagtcgctttcggtcggtctc
gtcagccggtccgaacagatcgaaaccacgatgcattcgctcgaggatatcgtccttaaa
gcattctcaggcgctgacgagctgtcaaaacgcgccgctgttcggcttgaaggcggtctg
cgcaatgctgcagaaagtgccaccaagctgctggacgagaccgagggcaaggcacattcc
gttgcaggcgtaatgcgcgaaagcattcgcgaagcggtggaagacaccgacaagctgttg
agcgaagccgaggcccgcgcacaatccgctgccaacgtaatggctggaaacatgcgcggc
gcggtcgaagacactgacaagctgttgcgcgccaccgaggctcgcgcacaatccgctgcc
agcgtgatgactggaaacatgcgcggtgctgtggaagacaccgacaagctgttgggtgaa
gccgaagcccgggcgcaatctgctgccagcttgctgaccggaaacatgcgcggcgccatc
gaagacgccgacaagctgatgcgcggttccgaaacccgcgcacagaccgcagccggcctg
atgcgtgaaaccgtgcgcgaagccattgaggatgcgatcacccggttctccggcgcgacc
gatgaaatccggaagtcggccgctgatatcaagcgcgaactggatgacaccagaagcgaa
ctcaagcgcggtgcgttcgacctgcctgaggaaacacgcgaaagcgcagccgccatgcgc
cgtgctgtcgccgatcagatcaaggcgctgcaggaactctcgcagatcgtcggccagtcg
agccagcgcatcgaggtcagcgagccggcacctcgtcctgcgcctcgcgccgccgttcag
caggctgcaccccagcgtcaacctgctcctgctgcacctgctccagcgccacgcattgag
gttccggcccaacgcgtgccattgcgcggcagcttcgaaactgccggcgccgctccggcc
aagagcgaaggctgggtcagcgatttgctgcgcgccgcttcccgcgaggaacaggcccct
gctcccgcgcccgtggcgcaaaagaagcccgagcgcaatccacgccatgtggttgaatcg
ctgaactcgctgtccgtcgatatcgcccgcgccatcgaccacgatgcctcggtcgatctg
tggcggcgttatcagcgcggcgagcgtgacgtcttcacccggaggctctacacgctcaag
ggccagcagacctttgatgagatcaagaacaagtacggccgcgagcctgagttccgcgct
gcggttgaccgttacatcgccgatttcgaaaagctgctgtccgacgttgcccgcaacgac
cgcgacaacatgatgacccagacctatctgacctcggacaccggcaaggtctacaccatg
ctggcccatgccagtggtcgctttgaccgcgactga
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