Hoeflea sp. IMCC20628: IMCC20628_01977
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Entry
IMCC20628_01977 CDS
T03926
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
hoe
Hoeflea sp. IMCC20628
Pathway
hoe02024
Quorum sensing
hoe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hoe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IMCC20628_01977
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
IMCC20628_01977
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hoe03019
]
IMCC20628_01977
03036 Chromosome and associated proteins [BR:
hoe03036
]
IMCC20628_01977
Messenger RNA biogenesis [BR:
hoe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
IMCC20628_01977
Chromosome and associated proteins [BR:
hoe03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
IMCC20628_01977
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Motif
Other DBs
NCBI-ProteinID:
AKI00682
UniProt:
A0A0F7PHJ4
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All DBs
Position
2047178..2047426
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AA seq
82 aa
AA seq
DB search
MAERSQNLQDLFLNTVRKQKISLTIFLINGVKLTGVVTSFDNFCVLLRRDGHSQLVYKHA
ISTIMPSQPVQMFENEDAATGA
NT seq
249 nt
NT seq
+upstream
nt +downstream
nt
atggcggaacgttcacaaaatctgcaggacctatttctcaacacggttcggaaacagaaa
atctcgctgacgatcttcttgatcaacggagtgaagttgaccggtgtggtcacctcattt
gataatttctgcgtcctgctgaggcgcgatggtcattcgcagcttgtctacaagcatgcg
atttccacgatcatgccgagtcaaccggttcaaatgtttgaaaatgaggacgccgcaacc
ggcgcctga
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