Hoeflea sp. IMCC20628: IMCC20628_02070
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Entry
IMCC20628_02070 CDS
T03926
Name
(GenBank) ABC-type oligopeptide transport system, periplasmic component
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
hoe
Hoeflea sp. IMCC20628
Pathway
hoe02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hoe00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
IMCC20628_02070
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hoe02000
]
IMCC20628_02070
Transporters [BR:
hoe02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
IMCC20628_02070
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GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
AKI00774
UniProt:
A0A0F7PNQ2
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Position
2153496..2155319
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AA seq
607 aa
AA seq
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MRRMLATIMVIAGGLVSVVPNAVAEPVHGIAMHGAPALPADFSHLPYVNPDAPKGGKVTY
GVVGTFDSVRPFIVRSMRTHARGVVDPEFGNLIYETLMQRSQDEPFTLYGLLAESVEWDE
DRSFIQYNINPAARWSDGKPVTADDVIFTMELFKAKGRPPYSTRLNRVSKMEKISDLSVR
FAFNEESNREFPLILSLSPVLPKHATDPETFDQSTLEPGIGSGPYLISDIKPGERISFSR
REDYWAKDLPIKRGTDNYDDIVVEYFLSETAQFEAFKKGVFDVYPDGSATNWTRAYDFPA
VTDGEVVRKEYDSKTPSGMYGFVFNTRRPMFQDVRVRRAFTLLFDFEWANRSLYNNSYTR
THSFWDGSDLSSYGKPADQREREILAPFPDAVSADILDGTWTLPVTDGSASDRKVQRAAL
TLLQEAGFQIKGGKLLGADGTPFAFDLMTQNEGQEKLAVAYQRSLAALGIAMSIRTVDDA
QYQQRSQTFDYDMIVKSYTSSLSPGAEQLTRWGSASRDREGSFNFAGVASPAVDATIDAM
LNARTADDFRSSVRAFDRVLMSGHYVIPAFHLGKARVAHRSRIAAPEGDPPLYGYYLPAW
WDTSAKP
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgagaagaatgctggcgacgataatggtgattgctggcgggctggtaagcgtcgtgccg
aacgcggttgccgaacccgtccatggtatcgccatgcacggcgcaccggcattgccagcc
gatttcagccatctgccctacgttaatcccgatgcacccaaaggcggcaaggtgacctat
ggcgtcgttggcactttcgacagtgtccggccgttcatcgtcaggagcatgcgcacccat
gctcgcggtgttgtcgatccggagttcggcaatctgatctatgaaacgctgatgcagcgc
tcgcaggacgaacccttcacgctttacggattgcttgccgagtcagtcgaatgggatgaa
gaccgcagtttcatccagtacaacatcaatcccgccgcgcgctggtctgatggcaagccg
gtgacggcagatgacgtcatcttcaccatggaactgttcaaggccaagggccgcccgcct
tacagcacgcgtctcaatcgggtgagcaaaatggagaagatcagtgatctgtcggtgcgg
ttcgccttcaacgaggagtccaaccgcgagttcccgctgatcctgtcgctctcgccggtg
ctgcccaaacatgccaccgatcccgagaccttcgaccagtcgacccttgaacccggcatc
ggctcaggcccttatctgatcagcgacatcaagcccggagagcgcatcagtttttcccgc
cgcgaggattactgggcaaaggacctgccgatcaaacgcgggaccgacaattacgatgac
atcgtcgtcgagtacttcctgtccgagacggcccagttcgaggccttcaagaagggcgtt
ttcgacgtctatcccgacggcagcgccaccaactggacgcgcgcctatgattttcccgcg
gtcactgacggcgaggtcgttcgcaaggaatatgacagcaagacgccgtcgggcatgtac
ggcttcgtcttcaacacccgcaggccaatgttccaggatgtgcgtgtacgtcgggctttt
accctgctgtttgattttgaatgggccaaccgcagtctatataacaacagctacacgcgc
acccactcgttctgggacggatcggacctgtcgagctatggaaagcccgccgatcaacgc
gaacgcgagatcctggcccccttccctgatgccgtctccgccgatattcttgacggcacc
tggacattgccggtgaccgatggctcggcaagtgaccgcaaggtgcagcgcgcagcgctg
acgctgctgcaggaagccgggttccagatcaagggcggcaagcttctgggggcagacggc
acgccgtttgcctttgatctgatgacccagaatgaaggccaggagaaactggcggtggcc
tatcagcgctcattggcagcgcttggcatcgccatgtcgatccgcaccgtcgatgacgcg
caataccagcagcgctcgcagaccttcgactacgacatgatcgtcaaatcctacacttcg
tcgctgtcaccgggcgcagagcagctcacccgctggggatcggcatcgcgcgaccgtgag
ggctctttcaatttcgccggggttgccagcccggccgttgacgcgaccatcgacgcgatg
ctcaatgcccgcacggccgatgatttccgttcctcggtgcgcgcctttgatcgcgtgttg
atgtccgggcactatgtgatcccggcctttcatctcggcaaggcacgggtggcccatcgc
agccgcattgccgcgcccgaaggtgatccgccgctttacggctactatctgccggcctgg
tgggatacatcagccaaaccctga
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