Hoeflea sp. IMCC20628: IMCC20628_02312
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Entry
IMCC20628_02312 CDS
T03926
Name
(GenBank) DNA topoisomerase I, bacterial
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
hoe
Hoeflea sp. IMCC20628
Brite
KEGG Orthology (KO) [BR:
hoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hoe03032
]
IMCC20628_02312
03400 DNA repair and recombination proteins [BR:
hoe03400
]
IMCC20628_02312
Enzymes [BR:
hoe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
IMCC20628_02312
DNA replication proteins [BR:
hoe03032
]
Prokaryotic type
DNA Topoisomerases
IMCC20628_02312
DNA repair and recombination proteins [BR:
hoe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
IMCC20628_02312
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AKI01011
UniProt:
A0A0F7PLH4
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All DBs
Position
2402510..2405140
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AA seq
876 aa
AA seq
DB search
MNVVVVESPAKAKTINKYLGSGYTVLASFGHVRDLPAKDGSVLPDEDFEMKWEVDTASNK
RLKDITEALKGADSLILATDPDREGEAISWHVLEVLTKKKALKDKKVSRVVFNAITKKSV
LDAMANPREIDTPLVDAYLARRALDYLVGFNLSPVLWRKLPGARSAGRVQSVALRLVCDR
ESEIERFNSEEYWQISADLKTPRGDGFTARLTSHDGEKMTKMSVTNGDLAGNIKDMLEGA
SFVTDSVEAKPTKRNPSPPFTTSTLQQAASSKLGFNASRTMQVAQKLYEGIDIGGETVGL
ITYMRTDGVQMAPEAIEEARAAISARFGARYCPEKPRLYTTKAKNAQEAHEAIRPTGFER
APDDVKRYLDSDQLKLYDLIWKRATASQMASAEIERTTVDITASKDGKTAGLRATGSVVR
FDGFIAAYTDAKEDGEQSDGDDDDARLPEINAQEALAKEKINATQHFTEPPPRFSEASLI
KKMEELGIGRPSTYASTLATLRDREYVTIENRRLTPEPKGRLVIAFLENFFNRYVEFGFT
ADLEEKLDRISAGELAWKDVLREFWTEFHQHIDDTKDLRVTQVLDALNEALAPLVFPVRE
DGSNPRICPTCGTGNLSLKLGKYGAFVGCSNYPDCSFTRQLSNDQNAEGDAALSNEPKDL
GKDPYTEEPITLRTGRFGPYVQRGEGKEAKRASLPKGWAVDTIDHEKALALLSLPRDVGQ
HPESGKMISAGLGRYGPFVLHDGTYGNLESVEDVFSIGLNRAVTVIAEKVAKGPGRGRGT
PAALKALGDHPDGGPVTVRDGKYGPYVNWAKINATLPKDKVPTEVTLEEALEMIAAKAAA
SGKKTKAPAKKAAKPKAKAKPKAKAKKPAAAKAKKD
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtagtggtagtcgaatcgcctgcgaaggcaaaaaccatcaacaaatacctcgga
agcggctacacggtgctggcatcgttcggtcacgttcgtgacttgccggccaaggacggc
tcggtgcttcccgatgaggatttcgagatgaagtgggaggtcgacactgcctccaacaag
cgcctcaaggacattaccgaagcgctcaagggcgccgactccctgattctggcgactgac
ccggatcgcgaaggcgaagccatttcctggcatgtactggaagtgctgaccaagaagaag
gcgctgaaagacaagaaggtctcccgcgtcgtcttcaacgccatcaccaagaaatcggtt
ctcgacgcgatggccaatccgcgcgagatcgacacgccgctggtcgacgcctatctggcg
cgccgggcactcgactatctggttggcttcaatctctcgccggtgttgtggcgcaaattg
ccaggcgcccgttcggcaggacgggtccagtcggtggcgctcaggcttgtctgcgaccgc
gaaagcgagatcgaacggttcaactctgaagaatactggcagatctcggccgatctgaag
accccgcgcggagacggctttaccgcacggctcacctcgcatgacggcgagaagatgacc
aagatgtcggtcaccaatggtgacctggccggaaacatcaaggacatgcttgagggcgcg
tcctttgtcaccgacagcgtcgaagccaagccaaccaagcgcaacccgtcgccgccgttt
acgacgtcgacattgcagcaggccgcgtcctcaaagctcggcttcaatgcctcgcggaca
atgcaggtggcgcaaaagctctatgagggcatcgacattggcggcgagaccgttggtctg
atcacctatatgcgtaccgacggcgtgcagatggcgcccgaggcgatcgaagaagccaga
gccgcgatttcggcacgcttcggcgcgcgttactgcccggaaaagccgcgtctttacaca
accaaggccaagaatgcgcaggaggcccacgaagccatccggccaaccggctttgaacgg
gcgcctgacgacgtcaaacgctatctcgattccgaccagctcaagctttatgacctgatc
tggaaacgcgccaccgccagccagatggcgtcagccgagatcgaacgcaccacggtcgac
atcactgcttccaaggacggcaagaccgccggcctgcgcgccaccggttctgtggtccgg
tttgacggcttcatcgccgcctacaccgacgccaaggaagatggcgagcaatccgacggc
gacgatgatgatgcccgcctgccggagatcaacgcccaggaagcgctggccaaggaaaag
atcaacgccacccagcatttcaccgagcctccgccgcggttttcggaagcttcgctgatc
aagaagatggaagagctcggcatcggccgcccttcgacctatgcctcgacactggcaacg
ctgcgcgaccgtgaatatgtgacgatcgagaaccgcaggctgacccctgagccgaagggc
cgtctggtcattgcgtttctggagaatttcttcaaccgctatgtcgaattcggttttacc
gccgatctcgaggaaaagctcgaccggatttcggcgggtgaactggcctggaaggatgtg
ttgcgcgaattctggaccgaattccatcagcatatcgacgacaccaaggaccttcgcgtt
acccaggtgcttgatgcgctcaacgaggcgctggcgccgctggtgttcccggtgcgcgaa
gatggttccaacccgcggatctgcccgacctgcggcaccggcaatttgtcgctgaaactc
ggcaagtacggcgcctttgtcggctgttcgaattatcccgattgcagcttcacccggcag
ctttccaacgatcagaacgccgaaggcgatgcggcgctgtctaatgaacccaaggatctg
ggcaaggatccctataccgaagaacccatcacgctgcgcaccggccgtttcggcccctat
gtgcagcgcggcgaaggcaaggaagccaaacgcgccagcttgcccaagggctgggcggtc
gatacgattgatcacgagaaagctctcgcactgctgagcctgccgcgtgatgtcggccag
caccccgaatcgggaaagatgatctctgccggactcggccgctatggcccgttcgtgctg
catgacgggacctatggcaatctggaaagcgtcgaagacgtgttttcaatcggcctcaac
cgcgcagtcaccgtgatcgccgaaaaggtggccaagggacctggccgcggacgtggcaca
cccgcagcgctcaaggcgctgggcgaccaccccgatggtggaccggtcaccgtgcgtgac
ggcaaatatggcccctatgtcaactgggccaagatcaacgccacgctgcccaaggacaag
gtgcccaccgaggtaacgcttgaagaagcgcttgagatgatcgccgccaaagctgccgca
tcaggcaagaaaaccaaggcgccggccaagaaggccgccaagccgaaggccaaggcgaag
ccgaaagccaaagcaaagaaaccagccgccgcgaaggcgaagaaggactga
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