Hoeflea sp. IMCC20628: IMCC20628_02452
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Entry
IMCC20628_02452 CDS
T03926
Name
(GenBank) putative permease
KO
K07091
lipopolysaccharide export system permease protein
Organism
hoe
Hoeflea sp. IMCC20628
Pathway
hoe02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
hoe00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
IMCC20628_02452
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hoe02000
]
IMCC20628_02452
Transporters [BR:
hoe02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Lipopolysaccharide transporter
IMCC20628_02452
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LptF_LptG
Motif
Other DBs
NCBI-ProteinID:
AKI01150
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Position
2552020..2553219
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AA seq
399 aa
AA seq
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MKQIERYILRRMSSLTFWSLTAVTLLVMTTQVLVRVDVLTTTGQALSAFLLLAATLIPSV
LSIVAPFALLIGVSQVLSGMNADSELVVIEAAGVPPATVLKPVLVLSAVLSILVLLVNNF
VEPWSNRKLYDVLAQAQSDLFSVAVRSGTFMRLENGLYVQVNEKLPGGELGGIFLADSRT
EGNESIYYARSGVVKTVGETNILYLVDGELQQRNLSNNQISIVTFTSYALDMAAFVPAGG
ASARRPKEQSTLYLLDPAEDDYYVQKADFVIKQELVQRFSTWMYPLAFGLVAFTFLGKAR
SNRHEQFQNGAIVAGITLGTRGFGFYSGDEAGSSVFMEVLTYAIPAGIIVVFGFLALTGR
TLTIPRAWARLNDRLIEYVRGKFDRRKRQRQASTESGSA
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaaatcgaacgttacatattgcgccgaatgagttcgctgaccttttggtcgctg
acggcggtaacgctgcttgtgatgaccacgcaggtgctggttcgcgtcgatgtgctgacc
accaccggtcaggcgctcagcgcgttccttttgctggccgccaccctgattccgtcggtg
ctgtcgatcgtggcgccgtttgcattgctgatcggggtaagccaggtcttgtcaggcatg
aatgccgacagcgaactggtggtgatcgaggcagccggcgttccaccggcgactgtgctc
aaacccgtgctggtgttgtctgcggtgctttcgatcctggtgcttctggtcaacaacttt
gtcgagccatggtcaaaccgcaagctttatgacgtgcttgcccaggcacaatcggatctg
ttttcggttgcggttcgttccggcaccttcatgcgcctggaaaacggactctatgtgcaa
gtcaacgaaaagctgcctggcggtgaactgggtggaattttcctggctgattcacggacg
gagggcaacgaatccatctattacgcccgcagcggcgtggtcaaaaccgtcggtgaaacc
aacatcctatatttggtcgatggcgagttgcagcaacgcaacctgagcaacaaccagata
tcgattgttacattcacctcttatgcgctggacatggccgcttttgtccccgctggcggg
gcttcggcacgcaggccgaaggaacagtccacgctctatcttctcgatccggcggaggat
gactattatgtccagaaggccgactttgtgatcaagcaggaattggtgcagcggttttct
acatggatgtaccccctggctttcgggctcgtcgccttcacgtttctgggcaaagcccgc
tcaaaccggcatgaacagtttcagaacggcgccatcgtggcaggcatcacgctgggcacc
cgcggctttggcttttacagcggcgatgaagccggctccagtgttttcatggaggttttg
acctacgcgatccccgccgggatcattgttgtcttcggtttcctggccctgaccggcagg
acgctgacgatccccagggcatgggctcgcctcaatgaccggctcatcgagtatgtacgg
ggtaagttcgaccgacggaagcgccaacgccaggcatcgaccgagagtggttcggcatga
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