Hoeflea sp. IMCC20628: IMCC20628_02616
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Entry
IMCC20628_02616 CDS
T03926
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
hoe
Hoeflea sp. IMCC20628
Pathway
hoe03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
hoe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
IMCC20628_02616
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hoe03400
]
IMCC20628_02616
DNA repair and recombination proteins [BR:
hoe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
IMCC20628_02616
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Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
AKI01313
UniProt:
A0A0F7PKK6
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All DBs
Position
complement(2706040..2706936)
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AA seq
298 aa
AA seq
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MAARPIWKGQLRLSLVSIPVEMYSATKTGARISFRQIHGPSGKPVRYEKTVPGVGPVDAD
DIMKGFEYEKDQYLLIDPDDVDDIKLETKKTLELVQFVDACEISPLYFNKPYYLVPTDDL
AEDAYRVVRDALRETKMIGLGQVTMRGKEYLAAVKPSGDGLLLETLHYADEIRDADPLFS
EIEDDTADEDLLDVAKSLIKRKTAAFKADAFKDNYTAALRDLIDRKTKSKSTKRVQTDDT
SSDSGGGGNVIDLMAALKQSLAKAEGGKASTGSGKKSPTRSTKSTASGKKASARKKSA
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgcgaccgatatggaaaggacaattgcggttgtccctggtgtcgattcccgtg
gaaatgtattccgccaccaagacaggtgcgcgcatcagtttcaggcagattcacggacca
tcgggaaagccggtccgctacgagaagactgtgcccggtgttggcccggttgatgccgac
gatatcatgaaggggtttgaatatgagaaggatcagtatctgctgatcgatcccgacgac
gttgatgacatcaagctcgaaaccaagaaaacccttgagctggttcagttcgttgacgcc
tgcgaaatatccccgctctatttcaacaagccttattaccttgtgcctaccgacgatctt
gccgaagatgcctaccgggtcgttcgcgacgccttgcgcgaaaccaagatgatcgggctg
gggcaggtgaccatgcgcggcaaggaatatctggctgcggtcaagcccagcggcgatggt
ctgctgctcgaaaccctgcattatgcggacgagatccgcgatgccgatccgctgttttcc
gaaatcgaggacgacaccgccgacgaggatctgctcgacgttgccaaatcgctgatcaag
cgcaagacggctgccttcaaggctgacgctttcaaggacaattacaccgcagcactcagg
gatctgatcgaccgcaagaccaaaagcaaatcaaccaagcgggtccagaccgatgacacc
agcagcgacagcggcggtggcggcaatgtgatcgatctgatggcggcgctgaagcagagc
cttgccaaagccgagggtggcaaggcctccaccggatccggcaagaaatcacccacgcgc
tcaaccaaatcaacggccagcggcaagaaggcctcggccagaaagaaatctgcctga
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