Hoeflea sp. IMCC20628: IMCC20628_02680
Help
Entry
IMCC20628_02680 CDS
T03926
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
hoe
Hoeflea sp. IMCC20628
Pathway
hoe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hoe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IMCC20628_02680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hoe03019
]
IMCC20628_02680
03400 DNA repair and recombination proteins [BR:
hoe03400
]
IMCC20628_02680
Enzymes [BR:
hoe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IMCC20628_02680
Messenger RNA biogenesis [BR:
hoe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
IMCC20628_02680
DNA repair and recombination proteins [BR:
hoe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
IMCC20628_02680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
GARS_N
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
AKI01377
UniProt:
A0A0F7PJD8
LinkDB
All DBs
Position
complement(2785077..2786936)
Genome browser
AA seq
619 aa
AA seq
DB search
MPQSSSRIEPTFDRKAAGDPLAILKQVYGYPAFRGKQAAVVDQVISGGDAVVLFPTGAGK
SLCFQIPALCREGVGIVVSPLIALMRDQVEALKQLGVRAAALNSSLTREEFMGVRSAIAR
DELDLLYVTPERIVTSGFKDMIGNAKIALFAIDEAHCVSQWGHDFRPEYRELGHLGQAYP
GVPRMALTATADPHTREDIIDKLALRSAEVFTTSFDRPNIAYEIVGRDQPRQQLLRFLSR
HKGSSGIVYCLSRAKVDDTAEWLNKQGIRAKAYHAGMDRGMRDAHQDAFLKEEDLCLVAT
VAFGMGIDKPNVRYVAHLDLPGSVEAYYQETGRAGRDGLPSDAWMAYGMADVIQRGRMID
GGGSGDDIKRVERAKLNALLGICETAGCRRQAILSHFGEAHPGNCGNCDTCLKPVETWDG
TDAAIKALAAVYRTGERFGTGHLIDVLLGNENDKTTRFGHVEMPVFGVGKDISAKTWQSV
YRQLLAAGLVSVDHQAFGALKLEEAARAVFKHEREVRFRKDPPVSGKSARGASSSSSNAK
SALEEADMELFEALRAARMAIAKELSVPPYVVFPDTTLVAFATDRPSDHEEMLGVSGVGQ
SKLERYGDAFLKVIQAHQR
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgccgcagtccagtagccgtatcgagccgacgtttgaccgcaaggcagcgggcgacccg
cttgccatcctcaagcaggtctacggctacccggcgttccgcggcaagcaggcggctgtt
gttgaccaggtgatctcgggtggcgatgcggtggtgctgtttcccaccggcgccggcaag
tcgctgtgtttccagatcccggcgctgtgccgtgagggcgtcggcatcgtcgtctcacca
ttgattgcgctgatgcgcgaccaggtcgaagcgctcaagcaactgggcgtgcgcgccgca
gcactcaattcctcgttgacccgcgaagaattcatgggtgtgcgcagcgccatcgccagg
gacgaactcgatcttctgtatgtgaccccggaacgcattgtcacctccggcttcaaggac
atgatcggcaacgccaaaattgcgcttttcgccatcgacgaagctcattgcgtctcgcaa
tggggacatgatttccggcccgaataccgcgaactcggccatttgggccaagcctatccc
ggcgtgccgcgcatggcgctgacggcaaccgccgatccgcacacccgcgaagacatcatc
gacaagctggcgctgcgttcggcggaagtcttcaccacctcgtttgaccgccccaacatc
gcctatgagattgtcggccgtgaccagccgcgtcagcaattgctgcgctttctgtctcgc
cacaagggctcgagcggcatcgtctactgcctgtcgcgcgccaaggtcgacgacaccgcc
gaatggctcaacaagcagggtatccgggcaaaggcctatcatgcaggcatggaccgcggc
atgcgcgatgcccatcaggatgcgtttctgaaggaagaggatctctgcctcgtcgccaca
gttgccttcggcatgggcatcgacaagccgaatgtgcgctatgttgcccatctcgatctg
ccgggttccgtcgaggcctattaccaggaaaccggccgcgccgggcgcgacgggttgccg
tctgatgcctggatggcctatggcatggccgatgtcattcagcgcggacggatgatcgac
ggcggcggatcgggcgacgatatcaagcgggtggagcgcgccaagctcaatgcgctgctc
ggcatctgcgaaaccgcgggctgccgccggcaggcgatcctgtcgcatttcggtgaggcg
catccgggcaattgcggcaattgcgacacctgtctcaagccggtagagacctgggacggc
accgacgccgccattaaggcgctggcagcagtctaccggaccggagaacgtttcggcacc
ggccatctgatcgacgtgctgctcggcaatgaaaacgacaagaccacccgtttcggccat
gtcgaaatgccggtgttcggcgtcggcaaggatatttccgccaagacctggcagtcggtc
tacaggcaattgctcgccgccggtctggtgagcgtcgaccatcaggcctttggcgcgctg
aagctcgaagaggcggcacgcgccgtgttcaagcacgagcgcgaggtgcggttccgcaag
gacccgccggtttcgggcaaatccgcacgcggcgcgtcatcgagttcatccaacgccaaa
tccgcgctggaagaggcagatatggagcttttcgaggcactccgcgctgcccgtatggcc
atcgccaaggaattgtcggtgccgccctatgtggtgtttcccgacaccacgctggtggcg
ttcgcaacagaccgtccatcagaccacgaggaaatgctcggcgtttccggcgtcggccag
tcgaagctggaacgttacggcgatgccttcctgaaggtcattcaggcgcatcagcgttag
DBGET
integrated database retrieval system
