Hoeflea sp. IMCC20628: IMCC20628_03330
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Entry
IMCC20628_03330 CDS
T03926
Name
(GenBank) PAS domain S-box
Organism
hoe
Hoeflea sp. IMCC20628
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Paralog
Gene cluster
GFIT
Motif
Pfam:
CHASE
HATPase_c
MASE1
PAS_9
PAS
HisKA
PAS_4
Response_reg
PAS_8
PAS_3
HATPase_c_3
Diguanyl_cycl_sensor
HATPase_c_2
Motif
Other DBs
NCBI-ProteinID:
AKI02022
UniProt:
A0A0F7PL42
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All DBs
Position
complement(3485058..3489389)
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AA seq
1443 aa
AA seq
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MLLAKMLLVAVVYFGSGQLGLSLAVPPGYATVIWPPSGIALGAMILYGWRLWPGIFLGSV
LISVYGAGVYSAETGLDQAKALSALVIAAGSTLQALVGYALVRRLLGIPLSFNRIRDVLV
LFFAVGPVVCLVSPTIGVAALYFSGALPAEKVLDNWQTWWTGGIFGIIVFLPLVLIAPGG
PQRLSWRGKTLGNLQVTAMLLLLIPLGLTFYAWKISSEAAHDNGKIQFEALALESKKALL
SRINSYENALLGGVAYFQGSSTINRHEWKRYVDVLDIKKNFPGINGLGWISSLAPNGVDQ
FVRTTHADGAKNFTIHPEEADEARYVITYIEPENANRQALGLNIAFEENRKQAADLSKLT
GKPAITKRIILVQDEEKTAGFLLLHPMYRDGFQPGSSVEKWALFDGWIYAPFIAKNFMRE
LTKSQGNTVSLRVYDNVQEDVDTLIYESNKSRAGGHVPTFSKSEHVEIMQQEWLIVWEST
LGFEEDWRSNNPILILSGGLLITFLSGLFLFVTTARLSGTADRAYGRKALLLPGVVFAVL
AVGSVSLYRALDDKEEAHLKAMISSEISKIDLLITAETEAKMLALKRMASRMETATDRPV
HLWQVDARNYIDDLAGLRAVAWINEKGQMVESEQSTRNDRSVWVDAIMDASQADLAAMAV
KQDIPIIGPPIRLTAKERAFTAYLPLNAKGASAGYLAAIFSVSEFFSNEILPETLDRYQF
LITYDGDVQREFGNLNQSIARPWALESTIQIPDKLWSIQIIPTTQFLKSQQSLLPDAALI
AGLLISILTAMTAHMTLLSRLKTADLQESNERIKQESTRNSTVMNTVLDGVLTIGSEGTI
ESINPAGLRLFGYAQGEVVGKNVNMLMPTDNDYMNHYLKSGEGLAIGTGQQMSARRKDGS
IFPVDLSVNEMRLDGKRMLVSTLRDTSEAVAAARALSESNALKSAVMASTEYLIIATDMD
GKVMVFNEAAETALGYSAEEIVGKQSPALWHDQSEVEERSRVLSAELGFPVSADFETFTK
NVDVNGIDENEWTYIHRDGTRIPVLLTVTALRNESHQTTGYLGVIVDLTKRREIERLKSD
FVSIVSHELRTPLTSIRGALGLVMGAMSKEMPDKALRLIDIAHKNCERLTLLINDILDID
KIASGQMRFDMKQQELASLLKQAVDVNQPYADNLGVTIKISEIDPDLAVNADPERFAQVM
ANLLSNAAKFSSRDDQVEISAHRNGDLIRVVIKDNGEGIPEEFRPQIFGKFLQSDSSSTR
VKGGSGLGLHISKQIVERMGGVIGFETETGKGTTFWIDFPIPTQEVLAETIEPDDGRRSL
LHYRQRDVPTLLHIEDDEDLSRVLATYLQGTATVVTATTLKSAEVLLRSKQFDLIVLDLG
LPDGSGLEFLNTLSGLVELPVPVMILSASEVSDAVKQSVASVMVKSRASEAKIVKKIQSL
MAA
NT seq
4332 nt
NT seq
+upstream
nt +downstream
nt
gtgcttctggcaaagatgcttttggtcgccgtggtttactttggttcggggcaactaggc
ttgtcgctggccgttccgcctggctacgccacggtcatctggccaccgtcgggaatagct
cttggagcaatgattctttacggttggcgcctctggcctggcatttttctcggttctgtc
cttatcagtgtctatggggcaggcgtctattcagccgaaaccggcctggatcaggcaaag
gccctgagcgcattggtgatcgctgcgggatccactcttcaggccttggtgggatatgcg
ttggtcaggcgattgcttggtattccgctgagtttcaatcgtatccgcgacgtgttggtt
ctgttcttcgctgtcgggccggtggtttgtctggtttcgccgacaattggtgtcgccgcc
ttgtatttctctggcgccctgccagccgagaaggtcctggataactggcagacttggtgg
acgggcggcatttttggcatcatcgtgttcttgccactggtgctgatagccccggggggg
ccgcagaggctttcctggcgcggtaaaactttgggcaatctgcaagtcacggcaatgttg
ttactgctgattcctctcggtttgacattctatgcctggaagatttcgtccgaggcagcc
cacgacaatggcaagatccagtttgaagcactggcgctggagagcaagaaggcactttta
agccggattaattcctatgagaatgcacttctgggcggcgttgcctatttccagggttcg
agcaccatcaatcgccatgagtggaagcgctatgttgatgtgctggatatcaagaagaat
tttcccggcatcaatggcctgggatggatttcatcgctggcgccgaacggggtagatcag
ttcgtgcggaccacccacgcggatggggccaaaaactttacaattcatcccgaagaggcc
gacgaagctcgctatgtcatcacttacatcgagccggaaaatgccaaccggcaggcgctg
ggactgaacatagcctttgaagaaaaccggaagcaggcagccgatctatcgaagcttacc
ggaaaacctgccatcaccaaacgcattattctcgtacaggacgaggagaaaacggccggt
ttcctgctgttgcatcccatgtaccgggatggatttcagcctggatcgtcagttgaaaaa
tgggcacttttcgatggctggatctatgcgccgttcatcgccaaaaacttcatgcgggaa
ctgaccaagagccagggcaacacagtcagtctgcgtgtctacgacaatgtccaggaagat
gtcgatacgctgatatatgagagcaacaagtcccgcgcgggtgggcatgttccaactttt
tccaagagcgagcatgttgagatcatgcagcaggagtggctgatcgtctgggagagcact
ctcgggtttgaagaagattggcgcagcaacaacccgattctgatcctgtctggtggcctt
ctgattacctttttgtcaggcctgtttttgtttgtcaccaccgcgcgcctgtcaggaact
gcggatagggcctatggcagaaaggcgttgttgctgccaggtgtcgtgtttgcagtgctg
gcagtgggatcagtgtcgctttatcgcgctctcgatgacaaggaggaggctcatctcaag
gccatgatcagcagcgaaatcagcaagattgatttgctcatcaccgccgaaaccgaagcg
aaaatgctggcattgaaacgcatggcctcaaggatggagaccgccaccgatcgtccggtg
catttatggcaagtggatgcacgaaactatattgacgatctcgctggcctccgggccgtt
gcgtggatcaatgaaaaaggtcagatggtggaatccgagcaatcgacgcggaatgatcgg
tcggtctgggttgatgccatcatggacgcctcgcaagcagatttggcagccatggcggtc
aagcaggacatccccataatcggccctccaatccggttgaccgcaaaagagcgcgctttc
actgcgtatttaccgctcaacgcgaagggcgcctcggctggctaccttgccgcgatattc
tcggtgagcgagtttttcagcaatgagattcttcccgaaacactcgaccgctaccagttt
ctgattacctatgacggtgatgtccaacgtgagttcggcaatctgaaccagtcgattgcc
aggccttgggcgcttgaaagcacgatacaaatcccggacaagctctggtcgatacaaatc
attccgacaacgcagttcctgaagtcgcagcagtccctgctgccggacgccgctttgatc
gccggtcttctgatttcgattctgaccgccatgaccgcgcacatgacgcttttgtcacgg
ctgaagacagcggatctgcaagagtccaacgaacgcatcaagcaggaatcaacccggaat
tcgacggtgatgaataccgtcctggacggggtgttgaccattggttccgaaggcacgatt
gaatccatcaacccggcgggactgcggctctttggctatgcgcagggagaagttgtaggc
aagaacgtcaatatgctgatgccgactgacaatgattacatgaaccattacctgaagagc
ggtgaaggtctggcaatcggtaccggccagcaaatgtccgcccggcgcaaggacggttcg
atcttcccggtagatctctccgtcaatgagatgcgtcttgatggcaaacgcatgttggtc
agcactcttcgcgataccagcgaagccgtggcggcggcccgcgctctaagtgagtccaat
gcgctcaaatccgcggtcatggccagtaccgagtatctgattatcgcgaccgatatggac
ggcaaggtcatggtcttcaacgaggcggccgaaactgcattgggctactcggccgaagaa
atcgttggcaagcaatccccggcgttgtggcacgatcagtccgaagtcgaggagcgttct
cgtgtgctctcggcggagcttggctttccggtcagcgctgactttgagactttcaccaaa
aatgtcgacgtaaacggcatcgatgaaaacgaatggacctacattcacagggacgggacg
cgtattcctgttctcctaacagtaactgctttgcgcaatgaatcccaccagaccacaggc
tatctcggtgttatcgtagacctgacgaaacgtagggaaatcgagcgcctgaaatccgat
ttcgtgtccatcgtcagtcatgagttgcgcactccgttgacatccattcgtggcgcgctg
ggcctggtcatgggcgcgatgtcgaaggaaatgccggacaaggccctccgcctgatagat
atcgctcacaagaactgcgagcgattgacgcttctgatcaatgacattctcgacattgac
aagatagcctccggccagatgcggtttgacatgaagcagcaggaactggcgtcgcttctc
aagcaggcggttgatgtcaatcagccctatgcggacaatctcggtgtgaccatcaaaatt
tcagaaattgatccggacctcgctgtcaacgcagatccggaacggttcgcgcaggtgatg
gcaaatcttctctccaatgccgccaaattctccagcagggacgaccaggtggaaatttcg
gcccaccggaacggggatctgatccgtgttgtgatcaaggataacggcgaaggaattccc
gaagaattccgcccgcaaatctttgggaaattcctgcaaagcgattcctcctcgacacgg
gtcaaaggcggcagcggcctgggtcttcacatcagcaagcagattgtcgagcgaatgggt
ggagtgatcggtttcgaaacagaaaccggcaagggcaccactttctggatcgattttccg
attccgacccaggaagttttggcggaaacgattgaaccggatgatggccgacgctccctg
ctgcattatcgtcagcgtgatgtgccgacgctactccatatcgaggatgacgaggatctg
agccgggtgctggcaacctatctgcagggcaccgccaccgttgtcacggcgacgacactg
aaaagcgctgaagtcttgttacgctccaagcaattcgatctgattgttctggacttggga
ttgccggatggctcggggcttgagtttctcaacaccttgtccggtcttgtcgaactccca
gttccggttatgatcctgtcagcctcggaagtgtctgacgccgtcaaacaatcggtcgcc
tcggtgatggtgaagtcgcgggcctcggaggcgaaaatcgtcaagaaaatacaaagcctg
atggcggcgtaa
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