Hoeflea sp. IMCC20628: IMCC20628_03786
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Entry
IMCC20628_03786 CDS
T03926
Name
(GenBank) integration host factor, beta subunit
KO
K05788
integration host factor subunit beta
Organism
hoe
Hoeflea sp. IMCC20628
Brite
KEGG Orthology (KO) [BR:
hoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hoe03032
]
IMCC20628_03786
03036 Chromosome and associated proteins [BR:
hoe03036
]
IMCC20628_03786
03400 DNA repair and recombination proteins [BR:
hoe03400
]
IMCC20628_03786
DNA replication proteins [BR:
hoe03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
IMCC20628_03786
Chromosome and associated proteins [BR:
hoe03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
IMCC20628_03786
DNA repair and recombination proteins [BR:
hoe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
IMCC20628_03786
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
AKI02468
LinkDB
All DBs
Position
3982633..3982932
Genome browser
AA seq
99 aa
AA seq
DB search
MIKSELVQAIAARNPHLYHRDVENIVNAVLDEITEALSEGNRVELRGFGAFSVKNRPPRS
GRNPRTGEPVFVEEKWVPFFKTGKELRERLNPDNPGGDD
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
atgataaaatcagaactggttcaggcgattgccgcacgcaacccgcatctctatcaccgg
gatgtcgaaaatatcgtcaacgccgtgcttgacgagatcaccgaagcgctgtctgaaggc
aaccgggtcgaattgcgcggatttggggcattttcggtgaagaaccgtccaccgcgctcg
ggccgcaatccgcgcaccggcgagccggtgttcgttgaagagaaatgggtgccgttcttc
aagaccggcaaggaattgcgcgagcgcctcaatccggataaccccggcggcgatgactga
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integrated database retrieval system
