Hoeflea sp. IMCC20628: IMCC20628_03903
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Entry
IMCC20628_03903 CDS
T03926
Name
(GenBank) tRNA pseudouridine(55) synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
hoe
Hoeflea sp. IMCC20628
Brite
KEGG Orthology (KO) [BR:
hoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hoe03016
]
IMCC20628_03903
Enzymes [BR:
hoe01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
IMCC20628_03903
Transfer RNA biogenesis [BR:
hoe03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
IMCC20628_03903
Prokaryotic type
IMCC20628_03903
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
AKI02585
LinkDB
All DBs
Position
complement(4103764..4104699)
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AA seq
311 aa
AA seq
DB search
MGRRGKKKGRPISGWLVLDKPWDFGSTEAVSKIKWLFKAEKAGHAGTLDPLASGMLPIAL
GDATKTVPYVMDGRKIYEFTVAWGEQRNTDDLEGAVTDSSDIRPDQAAIEALLPAYTGVI
EQVPPAFSAVKIAGERAYDMAREGTVVEIPAREVEIHRITLLGCPDPDHAVFEVECGKGT
YVRALARDFGRELGCYGHISALRRTMVAPFAEEAMVPLADLIALEEIEDEAERLARLDAY
LVPAGEALGMLPRIDVSEDQAHRIRMGNPIILRGRDAPVATDDACAFVRGALLAIGDVAE
GEFRPRRVFKG
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgccgcggcaagaaaaagggccgtccgatctccggttggctggtcctcgacaag
ccgtgggatttcggatccaccgaggctgtctccaagatcaaatggttgttcaaggcggaa
aaggcaggccacgccggcacgctcgatccgttggcatcgggcatgctgccaattgcactt
ggcgacgccaccaagaccgtgccttacgtcatggacggccgcaaaatctatgaatttacc
gtcgcctggggtgaacagcgcaacaccgacgacctcgagggcgcggtaactgacagctcg
gacatccgtcctgaccaggctgccatcgaggccctgctgccggcctataccggcgtgatt
gaacaggttcctccggctttctccgccgtcaagattgctggcgaacgtgcctacgacatg
gcgcgcgaaggcactgtggtggaaattccggcgcgtgaagtggagatccaccggatcacg
ctgctcggctgtcccgatcctgatcatgcagtgtttgaggtcgaatgcggcaagggcacc
tatgtcagggccctggcgcgcgattttggccgtgaactgggctgctacggtcatatctcg
gccttgcgccgcacaatggtggctcccttcgccgaagaagccatggtgccacttgccgat
ctgatcgcgcttgaagagattgaggacgaggcagaacggctggctaggctcgatgcttac
ctcgtgcccgcaggcgaggcgctcggcatgctgccgcgcatcgatgtcagtgaagatcag
gctcaccgcatccgcatgggcaacccgattattctcagaggccgcgacgcgccggttgcc
accgacgatgcctgcgcctttgtccgcggtgcgctgctcgccatcggtgatgttgccgaa
ggtgaattcaggccccggcgggtattcaagggctga
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