Hoeflea sp. IMCC20628: IMCC20628_03908
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Entry
IMCC20628_03908 CDS
T03926
Name
(GenBank) NusA antitermination factor
KO
K02600
transcription termination/antitermination protein NusA
Organism
hoe
Hoeflea sp. IMCC20628
Brite
KEGG Orthology (KO) [BR:
hoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hoe03021
]
IMCC20628_03908
03009 Ribosome biogenesis [BR:
hoe03009
]
IMCC20628_03908
Transcription machinery [BR:
hoe03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
IMCC20628_03908
Ribosome biogenesis [BR:
hoe03009
]
Prokaryotic type
rRNA transcription factors
IMCC20628_03908
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
S1
KH_2
KH_NusA_C
KH_1
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
AKI02590
UniProt:
A0A0F7PSP2
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All DBs
Position
complement(4109047..4110702)
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AA seq
551 aa
AA seq
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MAVSANRLELLQIADAVAREKSIDREIVIEAMADAIQKAARSRYGSESNIRADINAKTGE
IRLQRLLEVVEHAEDYSLQIPLALARDRNPDAQLGDFIADPLPPMDFGRIAAQSAKQVIV
QKVREAERDRQYDEFKDRIGEIVNGTVKRVEYGNVIVDLGRGEGIVRRDETIPREAFRYG
DRVRAYVYDVRREQRGPQIFLSRTHPQFMVRLFQMEVPEIYDGIIEIRSVARDPGSRAKI
AVISNDSSIDPVGACVGMRGSRVQAVVGELQGEKIDIIPWSPSPATFIVNALQPAEVSKV
VLDEDAERIEVVVPDEQLSLAIGRRGQNVRLASQLTGWDIDILTEEEESQRRQKEFSERT
ALFMEALDVDEMVGQVLASEGFSQVEEVAYVDLGEITAIEGFDEETASELQTRAKEYLDR
LEAELDNKRKELGVEDELRTVPGITTQMMVALGADGIKTVEDFAGCAVDDLTGWSERKDG
ETKRFDGLFKGLDITRPEAESMILSARLAVGWITEDEVVMQEVDEDAEAEAESGEAEAET
ETKTEAGGEEA
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggcagtcagtgcaaacaggcttgagcttcttcagatcgccgatgcggtcgcacgcgag
aagtccattgaccgcgaaatcgtgatcgaagccatggctgatgcgatccagaaggccgcg
cgctcgcgctacggctcggaatccaatattcgtgccgacatcaacgccaagaccggcgaa
attcgtctccagcgtctgctggaagttgtcgagcacgccgaagactattccctgcagatc
ccgctggccctggcccgcgatcgcaaccctgatgcgcagcttggcgatttcatcgctgat
ccgctgccgccgatggatttcggccgcattgccgcccagtcggccaagcaggtcatcgtg
cagaaagtgcgcgaagccgaacgcgaccgccagtacgacgaattcaaggatcgcattggc
gaaatcgtcaacggcacagtcaagcgtgtcgaatatggcaacgtcatcgtcgacctcggc
cgcggtgaaggtatcgtccgccgcgacgagaccattccgcgcgaagccttccgctatggc
gaccgggttcgcgcctatgtctatgacgttcgccgcgagcagcgcggcccgcagattttc
ctctcgcgcacccatccgcagttcatggttcggctgttccagatggaagtgccggaaatc
tatgacggcatcatcgagatccgctcggtcgcccgtgatccgggcagccgcgccaagatc
gccgtgatctccaatgattcctccatcgatccggtcggcgcctgcgtcggcatgcgcggt
agccgcgttcaggcagtcgttggtgaattgcagggcgagaagatcgacatcattccatgg
tcgccatcgccggccactttcatcgtcaacgcactgcagccggcagaagtgtccaaggtt
gtgcttgacgaagatgccgagcgtatcgaagtcgttgtgcccgacgagcagttgtcgctg
gccatcggccgtcgcggccagaacgtccgtcttgcttcgcagctgaccggctgggatatc
gacatcctgaccgaagaagaagaaagtcagcgtcgccagaaggaattcagcgaacgcacg
gcgctattcatggaagcgcttgatgtcgacgaaatggtcggtcaggtgctcgcctccgaa
ggcttcagccaggtcgaggaagttgcctatgtcgatctcggtgaaatcaccgcgatcgag
gggttcgacgaagaaacagcaagcgaacttcagacccgcgccaaggaatatctcgacagg
ctcgaagccgaactcgacaacaagcgcaaggagcttggcgttgaggatgagttgcgtact
gttcccggtataaccacgcagatgatggtggcgctgggtgctgacggcatcaagaccgtt
gaagacttcgccggttgcgctgttgacgatctgaccggctggtcggaacgcaaggacggt
gaaaccaagcggtttgacggcctgttcaaggggctggacatcactcgccctgaagccgaa
tcgatgatcctctcagcccgacttgctgtcggctggatcaccgaggatgaggtggttatg
caggaagtggacgaagatgccgaagctgaagccgaatccggtgaagctgaagcggagacg
gaaacaaaaaccgaagcaggcggcgaagaggcctga
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