Hoeflea sp. IMCC20628: IMCC20628_04017
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Entry
IMCC20628_04017 CDS
T03926
Name
(GenBank) 3'-5' exonuclease
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
hoe
Hoeflea sp. IMCC20628
Brite
KEGG Orthology (KO) [BR:
hoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hoe03016
]
IMCC20628_04017
Enzymes [BR:
hoe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
IMCC20628_04017
Transfer RNA biogenesis [BR:
hoe03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
IMCC20628_04017
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GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
CIDE-N
Motif
Other DBs
NCBI-ProteinID:
AKI02696
UniProt:
A0A0F7PRJ3
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All DBs
Position
4233201..4233824
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AA seq
207 aa
AA seq
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MADIRTHKGDISDAAMALYSGDIAVDTETLGLVPRRDRLCVVQLSPGDGSADVIQIAAGQ
TRAPNLVALLSDRTKRKLFHYGRFDIAVLFNALDVTSTPVFCTKIASRLTRTYTDRHGLK
DITRELLGVELSKHQQSSDWAAETLTAAQLDYAASDVLHLHALTEKLTARLVRDGREAHA
EACFKFLPTRAKLDLLGWGETDIFAHS
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atggctgatatccgtacccacaagggcgatatttccgacgcggcgatggcgctttacagc
ggcgacatcgcggttgacaccgagacccttgggctggtgccgcgccgcgaccggctttgc
gtcgtgcagctgtcgcccggtgacggttctgccgatgtgatccagatcgctgcgggtcaa
acccgcgcccccaatctggtggccctgctttccgatcgcaccaagcgcaagctgttccac
tatggccgttttgacattgccgtgctgttcaacgcgctggacgtgacatcaacgccggtg
ttctgcaccaagatcgcctcgcggctgacccgcacctataccgaccgtcacggcctcaag
gacatcaccagagagcttctgggcgtcgagctgtccaagcaccagcaatcgtctgactgg
gccgcagagacgctgacagcggcacagctggactatgcggcttccgatgtgctgcatctg
catgcactgaccgagaagctgaccgcccggctggtccgcgacgggcgcgaagcccatgcc
gaggcctgcttcaaattcctgcccacccgcgccaagctggacctgctgggttggggtgaa
accgacattttcgcccatagctaa
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