Hoeflea sp. IMCC20628: IMCC20628_04019
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Entry
IMCC20628_04019 CDS
T03926
Name
(GenBank) ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
hoe
Hoeflea sp. IMCC20628
Pathway
hoe03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
hoe00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
IMCC20628_04019
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
hoe03011
]
IMCC20628_04019
Ribosome [BR:
hoe03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
IMCC20628_04019
Bacteria
IMCC20628_04019
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
OB_RRP5
PCB_OB
OB_RRP5_4th
RuvA_N
DUF5446
Motif
Other DBs
NCBI-ProteinID:
AKI02698
UniProt:
A0A0F7PPG5
LinkDB
All DBs
Position
complement(4234923..4236629)
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AA seq
568 aa
AA seq
DB search
MPNTESMTDEFASLFAESLATQDLAEGYVAKGIVIAIEKDVAIIDVGLKVEGRVPLKEFG
AKSKDGSLKVGDEVEVYVERIENALGEAMLSREKARREESWIRLEEKFNAQERVEGVIFN
QVKGGFTVDLDGAVAFLPRSQVDIRPIRDVSPLMHITQPFEILKMDKRRGNIVVSRRTVL
EESRAEQRSEIVQNLEEGQTVEGMVKNITDYGAFVDLGGIDGLLHVTDMAWRRVNHPSEI
LSIGQTVKVQIIRINQDTHRISLGMKQLESDPWDGIGVKYPAGKRITGTVTNITDYGAFV
ELEPGIEGLIHVSEMSWTKKNVHPGKILSTTQEVDVVVLEVDPNKRRISLGLKQTLENPW
EVFAQTHPAGTEVEGEVKNKTEFGLFIGLDGDVDGMVHLSDLDWNRPGEQVIEEFNKGDM
VKAVVLDVDVDKERISLGIKQLGKDSIGDAAASGDLRKNAIVSAKVTAITDGGLEVVLVD
HEDLSSFIRRSDLSRDRDEQRPERFSVGQTVDARVTNFSKKDRKVGLSIKALEIAEEKQA
VAQFGSSDSGASLGDILGAALKKQNSED
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgcctaacactgaatccatgacagacgaattcgcatcgctgtttgccgaatcgcttgcc
acgcaggacctcgccgaaggctatgtcgccaagggtatcgtcatcgccatcgagaaggac
gtcgccatcatcgacgtcggtctcaaggtcgaaggccgcgtgccgctgaaggaattcggc
gccaagtcgaaggacggctcgctcaaggtcggcgacgaagtcgaagtctatgtcgaacgc
atcgaaaatgcgctgggcgaagccatgctgtcgcgcgaaaaagctcgccgcgaggaaagc
tggatccgtctcgaagaaaaattcaatgcgcaggagcgtgttgaaggtgtcatcttcaac
caggtcaagggcggcttcaccgtcgatctggacggcgccgtggccttcctgccgcgcagc
caggtggacatccgcccgatccgcgacgtctcgccgctgatgcacatcacgcagcctttc
gaaatcctcaagatggacaagcgccgcggcaacatcgttgtctcgcgccgtaccgttctc
gaagagagccgtgccgaacagcgttcggaaatcgtgcagaacctcgaagaaggccagacc
gttgaaggcatggtcaagaacatcaccgattatggtgcgttcgttgatcttggcggcatc
gacggcctgctgcacgtcaccgacatggcatggcgccgcgtcaaccatccgtccgagatc
ctgtcgatcggtcagaccgtcaaggtccagatcatccggatcaaccaggacacacaccgc
atctcgctgggcatgaagcagctggaaagcgatccgtgggatggtatcggcgtcaagtac
cctgccggcaagcgcatcaccggtactgtcaccaacatcaccgactacggcgcattcgtc
gaactggagccaggcatcgaaggcctaatccacgtttcggaaatgtcctggaccaagaag
aacgtgcatcccggcaaaatcctgtcgacaacgcaggaagttgacgtggtcgttctcgaa
gtcgacccgaacaagcgccgcatctcgctcggcctcaagcagacgcttgagaatccttgg
gaagtgttcgctcagacccatcctgccggcaccgaagtcgaaggcgaagtcaagaacaag
accgaattcggcctgttcatcggcctcgacggcgacgtcgacggcatggttcacctctcc
gacctcgattggaaccgtccaggcgaacaggtcatcgaggagttcaacaagggcgacatg
gtcaaggccgtcgtgctcgacgtcgatgtcgacaaggaacgcatctcgctgggcatcaag
cagcttggcaaggactcgatcggcgacgccgccgcttcgggcgatttgcgcaagaacgct
atcgtctctgccaaggtgacagcgatcaccgacggcggtctcgaagtggttctggttgat
cacgaagacctgtcttcgttcatccgccgctcggacctgtcgcgtgaccgtgacgagcag
cgccctgagcgtttctcggtcggccagacagtcgacgcccgcgtgaccaacttctccaag
aaggaccgcaaggtcggtctgtcgatcaaggcgctggaaatcgccgaagagaagcaggca
gtcgcacagttcggctcgtccgactcgggcgcttcgctcggcgacattctgggcgcagcc
ctgaagaagcagaacagcgaagactga
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