Hoeflea sp. IMCC20628: IMCC20628_04063
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Entry
IMCC20628_04063 CDS
T03926
Name
(GenBank) DNA polymerase III, subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
hoe
Hoeflea sp. IMCC20628
Pathway
hoe03030
DNA replication
hoe03430
Mismatch repair
hoe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hoe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
IMCC20628_04063
03430 Mismatch repair
IMCC20628_04063
03440 Homologous recombination
IMCC20628_04063
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hoe03032
]
IMCC20628_04063
03400 DNA repair and recombination proteins [BR:
hoe03400
]
IMCC20628_04063
Enzymes [BR:
hoe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
IMCC20628_04063
DNA replication proteins [BR:
hoe03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
IMCC20628_04063
DNA repair and recombination proteins [BR:
hoe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
IMCC20628_04063
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DUF3646
DNA_pol3_delta2
AAA
AAA_22
AAA_16
RuvB_N
AAA_30
AAA_5
AAA_19
AAA_14
AAA_24
AAA_18
TsaE
DUF815
SKI
SRP54
CbiA
AAA_assoc_2
AAA_2
AAA_33
nSTAND3
AAA_28
AAA_3
ABC_tran
Rad17
RNA_helicase
AAA_17
VapE-like_dom
Motif
Other DBs
NCBI-ProteinID:
AKI02741
UniProt:
A0A0F7PRN4
LinkDB
All DBs
Position
complement(4286549..4288393)
Genome browser
AA seq
614 aa
AA seq
DB search
MDDLTGTNTAPSGTAPEAKSPYRVLARKYRPKDFTDLIGQEPMVRTLTNAFSTGRIAQAW
MLTGVRGVGKTTTARILARALNYQTAEIDQPTIDLTVPGEHCQAIMEGRHVDVIEMDAAS
HTGIDDIREIIEQIRYRPVSARYKVYIIDEVHMLSNQAFNGLLKTLEEPPSHVKFIFATT
EIRKVPITVLSRCQRFDLRRIDSGLLVAHFRNVSDQEGILIDDESLAMIARAAEGSVRDG
LSLLDQAIAHGGGGVDAEAVRSMLGLADRSRIVGLFGSLMTGDVAAALANYRDQYNSGAS
PSVILTDLADFTHLVTRLKFVPQAGEDPSLTETERLNGADFAGTLSTVILSRVWQMLLKG
ITETDTSSRPAAAAEMALIRIGHAASLPSPEDAVKAFHNSGGTTSGAASTSGGGQPSGGG
GATARAVGERRMPQGGGGGQPAMRLAHSAEPTVATPALAEPVQEIAITSLEDMVALAEKF
RDIAMKVQIRTGVRLVRIEPGRLEISLTPEASPSLPGELIKKLADWTGAKWIVTLSREEG
APTLSERETAKRDALVSDARQDPDVAAILAKFPGSRITDVRIAVTEEILAETVLSPSEDG
DILPDEMDPDDESD
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggacgatttaaccggcacgaatacagccccctcggggacagcgcctgaggcgaagtca
ccgtaccgggttctggcgcggaaataccggcccaaggatttcaccgatctcatcggccag
gagccgatggtccgcacgctgaccaatgccttttccaccggccgcattgcacaggcctgg
atgctgactggtgtgcgcggtgtcggcaagaccacgacggcgcggattctggcgcgggcg
ctgaattaccagactgccgagatcgaccagccgaccatagacctgaccgttccgggcgaa
cattgccaggcgatcatggaaggtcgccatgtcgatgtcatcgagatggatgccgcctcg
cataccggcattgacgatatccgcgagatcatcgagcagatccgctaccgcccggtgtcg
gcgcgctacaaggtctacatcatcgacgaagtgcacatgctctccaatcaggccttcaac
ggcctgctcaagaccttggaagagccgccttcacatgtgaagttcatctttgccaccacc
gagattcgcaaggttccgatcaccgtgctgtcgcgctgccagcgctttgacctgcggcgg
atcgattcggggttgcttgttgcccatttcaggaatgtctccgatcaggaaggcattttg
atcgacgacgaatcgctggccatgatcgcccgcgccgccgaaggctcggtgcgtgacggg
ctgtcgctgcttgatcaggcaatcgcccatggtggcggcggggtcgatgctgaagccgtg
cgttcgatgcttggcctcgctgaccgatcccgcattgtcggattgttcgggtcgctgatg
actggcgacgttgcggcagctttggcaaattatcgcgatcagtataattcgggcgccagc
ccctcggtgatcctgaccgatctggctgatttcacccatctggttacccggctgaaattc
gtgccgcaggcaggtgaagatccctcattgaccgaaaccgagcgcctcaacggtgctgat
tttgccggaaccttgtcgaccgtcatactctcgcgggtctggcagatgctgctcaagggc
atcaccgaaaccgacacctcaagccggcctgctgcggcagcggaaatggccttgatccgg
atcgggcatgcggccagtttgccgtcgccggaggatgcggtgaaggcgtttcacaattcc
ggcggcacgacgtccggagcggcttcgaccagtggcggcgggcaaccctctggcggcggc
ggtgcgacggcccgcgcggtcggcgaacgccgcatgccgcaaggcggcggtggcggacaa
ccggcgatgcggctggctcattccgccgagcccacggtcgccacgccggctctcgcagag
cctgtgcaagagatcgccataacgtcacttgaagacatggtggcgctggccgaaaaattt
cgcgacatcgccatgaaggtgcagatccgaaccggtgtgcgtcttgtccggatcgagccc
ggccgcctcgagatcagcctgacaccggaagcaagtccgagcctgccgggtgagttgatc
aagaagctggcagactggaccggggcaaaatggatcgtgacgctgagccgcgaagaaggc
gccccgacgctttccgagcgcgagaccgccaagcgggacgcactggtcagcgatgcgcgt
caggatcctgatgtggcagccattctggcaaagttccccggctcgcggatcaccgatgtg
cgcatcgccgttaccgaggaaatcctggccgaaacggtgctgtcgccttccgaggacggt
gacatcctgccagatgaaatggatcccgacgacgaatccgattag
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