Hoeflea sp. IMCC20628: IMCC20628_04127
Help
Entry
IMCC20628_04127 CDS
T03926
Name
(GenBank) putative DNA metabolism protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
hoe
Hoeflea sp. IMCC20628
Pathway
hoe03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hoe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
IMCC20628_04127
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hoe03400
]
IMCC20628_04127
Enzymes [BR:
hoe01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
IMCC20628_04127
DNA repair and recombination proteins [BR:
hoe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
IMCC20628_04127
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4130
UDG
Motif
Other DBs
NCBI-ProteinID:
AKI02804
UniProt:
A0A0F7PU87
LinkDB
All DBs
Position
4354147..4355613
Genome browser
AA seq
488 aa
AA seq
DB search
MRHIALPDTGTADAWRKAARSCLREGLRPADISWGTAQTERGLFDDQQSEGGAPVKMTVP
RSFISLAETVCWHSDADRFARLYQFLWRLKDTPHLIADRGDRELAHLRGMEKSVHRCQHK
MKAFVRFREIGDRDDARRSFAAWFEPTHHTVEPTAGFFAGRFADMDWRIVTPEKTAIFQD
GSLSFAPGQPKPALPEDAGETLWLTYFRNIFNPARLKVQAMTSEMPKKYWKNLPEAATIP
DLIANAPARARAMAHAAPTLAPMRAGKARQQLAAHMSAWDGPLDALPAAIHACTRCPLHS
TATQAVPGIGPLDAALMIVGEQPGDQEDLTGLAFVGPAGQLFDKVAQSAGLDRSAAFVTN
AVKHFKFTPRGKRRLHQRPNSGEIEHCRWWLDAERNLVQPKLILALGATAAETLTGSGAN
ILRRRGTVEQLADGTPVLLSVHPSFLLRLPDPAEQEKQIALFEADLRRAVEMVVALTARS
GSQDSAAG
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgcgccatatcgccttgccagacaccgggaccgcggatgcgtggcgcaaggccgcgcga
tcctgcctgcgcgagggcctgcggcctgctgacatctcctggggaaccgcacagaccgag
cgggggctgtttgacgaccagcagtcggaaggtggcgcgccggtcaagatgacggtgccg
cgcagtttcatcagcctcgccgaaaccgtctgctggcatagcgacgccgatcggtttgcg
cggctctaccagttcttgtggcggctcaaagacacgccgcatctgattgccgaccggggt
gacagggaactggcgcatctccgcgggatggaaaaatcggtgcatcgatgccagcacaag
atgaaagcctttgtgcggtttagggaaattggcgatcgcgatgatgcgcggcgcagtttc
gctgcctggttcgagccgacccatcacacggtggagccgacagcgggcttctttgccggg
cggtttgccgatatggactggcggattgtcacgccggagaagaccgcgatctttcaggac
gggagcttgagctttgcgccggggcaacccaagccggccttgccagaggacgccggcgag
acgctgtggctcacctatttccgcaacatcttcaatccggcgcggctgaaggtgcaggcg
atgacctcggagatgccgaagaaatactggaagaacctgcccgaggcggcgacgatcccc
gacctgattgccaatgccccggcgcgcgcccgggcgatggcgcatgccgcaccgaccctg
gcgccgatgcgggcgggcaaggcgcgccagcagcttgccgcgcacatgtccgcctgggac
gggccgctggacgccctgcccgccgccattcatgcctgcacccgctgtccgctgcacagt
acggcgacacaggccgtgcccggaatcggaccactcgatgcggcgctgatgatcgtcggc
gagcaacctggcgatcaggaggatctgaccgggcttgcctttgtcggccctgccgggcag
ctgtttgacaaggtcgcgcaatcggcgggcttggaccggtcggcggcctttgtcaccaat
gccgtcaagcatttcaagttcacgccccgcggcaagcggcggctgcaccagcggcccaat
tccggcgagatcgagcattgccgctggtggctggatgccgagcgcaaccttgtgcagccg
aaactgatcctggcccttggcgccaccgctgccgagaccctgaccgggtcaggtgcgaac
attcttcgccgccggggaaccgtggaacagcttgccgacggcaccccggtgctgctgtcg
gtgcatccatcgttcctgctgcgcctgcccgatccggcggaacaggaaaagcagatagcg
ttgttcgaggcggatcttcgccgtgcggtggagatggtcgttgcgctgacggctcgatcc
ggcagtcaggactcggcggcagggtga
DBGET
integrated database retrieval system
