Hoeflea sp. IMCC20628: IMCC20628_04140
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Entry
IMCC20628_04140 CDS
T03926
Name
(GenBank) ABC-type dipeptide transport system, periplasmic component
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
hoe
Hoeflea sp. IMCC20628
Pathway
hoe02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hoe00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
IMCC20628_04140
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hoe02000
]
IMCC20628_04140
Transporters [BR:
hoe02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
IMCC20628_04140
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Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
AKI02817
UniProt:
A0A0F7PNG9
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Position
complement(4367015..4368505)
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AA seq
496 aa
AA seq
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MTKNPIAAAAVSILALGLALGVTPATAAKMDATIGMQLEPPNLDPTGGAAAAIDEVVYAN
VFEGLTRFGPDGEILPALAESWEISEDGLTYTFKLHTGVTFHDGSAFDAEDVKFSLDRAR
ADDSTNAQKALFADIASVEAVDPATVKITLSKPNGSFLFNMAWGDAVIVAPESAADNAAN
PVGTGPFKLAEWVKGDRVDLDRYPDYWGTSVKLDHVTFKFISDPTAAFAAMMAGDLDAYP
AFPAPENLVQFEADPRFEVIIGSSEGETILGMNNKKPPLDNILVRQAIAHAIDRQAIIDG
AMFGYGTPIGTHFAPHNPAYVDLTAQSAYDPEQSKALLAEAGIKDLTLSLKLPPPSYARR
GGEIIAAQLREVGITAEITNVEWAQWLDDVFKAKNFDLTIVSHTEPMDIGIYGRDDYYFQ
YGDPDFKAIMVDLDKATDPAKRTELMQAAQKKIADDYVNAYLFQLARTGVSNAKLKGIWP
NSPTQANDMTGVYWED
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgacgaagaacccgatcgcggctgcagccgtttcgatacttgcgctgggactggcgctc
ggcgtcacgccggcaaccgccgccaagatggacgccaccatcggcatgcagctcgagcca
ccgaatctcgatccgaccggcggcgctgcggctgcaattgacgaggtggtctacgccaat
gtctttgaaggcctgacccgctttggcccggatggtgaaatccttccggcactggccgaa
agctgggagatttccgaagacggtcttacctacacattcaaactgcacaccggcgtgaca
ttccacgatggttcggcctttgacgccgaagacgtcaagttctcgctcgaccgggcccgt
gctgacgattcgaccaatgcccagaaggcgctgtttgccgacatcgcttcggttgaagcg
gttgatccggccaccgtcaagatcaccctgtccaagccgaacggctcgttcctgttcaac
atggcctggggcgacgcggtgattgttgcgcctgagtcggctgccgacaacgcggccaat
ccggtcggcaccggcccgttcaaactggctgaatgggtcaagggcgatcgcgtcgatctc
gaccgttaccccgattactggggcacttcagtcaagctcgatcatgtgaccttcaaattc
atctccgacccgacagcggcatttgccgcgatgatggctggcgatcttgatgcctatccg
gccttcccggcacccgaaaacctggtgcagttcgaggccgatccgcgctttgaggtgatt
atcggttcgtccgaaggcgaaaccatactgggcatgaacaacaagaagccgccgctcgac
aacatcctggtgcgccaggcgatcgcccatgccatcgaccgccaggcgatcatcgatggc
gccatgttcggctacggaacaccgatcggcacccattttgccccgcacaacccggcctat
gtcgacctgactgcgcaatcggcttacgatccggagcaatccaaggcgctgctggccgaa
gccggtatcaaggatctgaccttgagcctgaaactgccgccgccaagctatgcccgtcgt
ggcggtgaaatcatcgctgcgcagttgcgtgaagtcggcatcactgccgaaattaccaat
gtcgaatgggcgcaatggctcgacgatgtgttcaaggccaagaattttgacctgaccatt
gtttcccacaccgaaccgatggatatcgggatctatggccgtgatgactactatttccag
tacggcgatccggacttcaaggcgatcatggtggatctcgacaaggccaccgatccggcc
aaacgcaccgagctgatgcaggcggcacagaagaaaattgctgacgactatgtcaacgcc
tatctgttccagctggctcgcaccggcgtttccaacgccaagctcaagggcatctggccc
aactcgccaacccaggccaacgacatgaccggtgtctactgggaagattga
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