Hoeflea sp. IMCC20628: IMCC20628_04190
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Entry
IMCC20628_04190 CDS
T03926
Name
(GenBank) double-strand break repair protein AddB, alphaproteobacterial type
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
hoe
Hoeflea sp. IMCC20628
Brite
KEGG Orthology (KO) [BR:
hoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hoe03400
]
IMCC20628_04190
Enzymes [BR:
hoe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IMCC20628_04190
DNA repair and recombination proteins [BR:
hoe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
IMCC20628_04190
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
AKI02867
UniProt:
A0A0F7PNK7
LinkDB
All DBs
Position
complement(4430814..4434005)
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AA seq
1063 aa
AA seq
DB search
MTRGAARILTIPPGAAFLTTLAEQILSGGLVPELAYDPDNPLSLAGATVFVPTRRAARVL
RSELTDLIGKGSAILPSIRPLGETDDDAGFFDSADPEILALDPPIPQTAAILRLADLVLA
WKMALPQTIRDHLGGMPLVAPANPADAIWLGRALFDLIQAVETEECDFAGLDTVIDADLQ
QWWQLTSEFLKIARNYWPALLTEISRSSPTHHHNVMIDVFTRGLAEASQSRPVIVAGSTG
TRPSTARLIATVAQLAQGAVVLPGLDHVMRASHWAALSQAATNRTADDGRAVVDVSIRSH
PQYGLLRLLQSSGLDADRIGEIPEIGHIGSEMTARRDLVSAALLPAACTEAWGEAGFLPD
PSVVQSGFEQVSLIEAANEREEAAALAAAMRRALEPGSGNPEPTAALITSDRNLARRVVT
ELGRYGIEANDSGGVPLASSPQGGLARLVVQVGFAPGDPVAIAALIKHPLARFGLTAQEA
KLRAGMVERIGLRGGSGAADINSLEELVRKRDPGRHDRHAPHWLSRISDEDASLAVDFAG
RVTEALSPLTSMLAETTESAIGRFAGLTAAVLERICADDTAALDGLWGDEAGADLASLLL
ETRDSGSTLAMSGHEWIDTLDALMAGRMVKPRAGGHPRAFIWGALEARLQHVDTLLLGGL
NEGVWPQAGQEDPFLSRSMKAAIGLEPPERRIGQAAHDFQMAMGAPVVVLSRSLRSGKAP
TVASRWLQRLLAVVGPEPAKALKHRGDALLAHARSLDQGPSTAPASRPEPCPPADLQPKS
YSFSEVGKLRRDPYAIYARRVLKLDPLEPFLADPGPRERGTLYHAILEEFISSTERSDRT
QQTLQGIAAKHFARAQLPDATALVWRMRFDKAARFIAEWEAGAADGLVRSLVETRASLEL
PGAGVKLTGMADRIDLRKDKTAWIIDYKTGGTPSRKEARILLDPQLALEAYALIHGGFSD
AGKIPVSGLFYIRLTGKEKVADRIDTDPEKPGKDEFVGPEDLGVKAVEELGRLVNLLRSG
KRGFLSRAIPQSARDFGGEYDHLARVAEWQTAVDAEGGDGDDG
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
gtgactcgcggtgcagccagaatcctgacaattccgcccggtgcggcgtttctgaccacg
ctggccgaacagatcctctccggcggtctggttccggagcttgcctatgatcctgacaac
ccgctgtcgctggccggcgccacggtgttcgtgcccacgcgccgcgccgcccgggtgctg
cgctccgaactgaccgatctgattggcaagggttcggcgatcctgccctcgatccgtccg
ctgggtgaaaccgacgacgatgcgggatttttcgattccgctgatcctgaaatcctggcg
ctggatccgccgataccgcaaacagcagccatcctgcgtctggccgatctggttctggcc
tggaaaatggccctgccgcaaaccattcgcgatcatcttggcggaatgcctttggtggcg
cccgccaacccggccgatgcgatctggctgggtcgcgccctgtttgacctgatccaggcg
gtggagaccgaggaatgcgatttcgccggcctcgatacggtgatcgatgcagatctgcag
caatggtggcagctgaccagcgaatttctcaagatcgcccgcaactactggccggcgctg
ctgactgaaatttcccgctccagcccaactcaccatcacaatgtgatgattgatgtgttc
acgcgcggcctggcggaagcatcgcagtcccggccggttatcgttgccggatcgaccggt
acaaggccgtcaaccgcccgcctgatcgccaccgtggcacagctcgcgcagggcgcggtt
gtcttgcccggcctcgatcacgtcatgcgcgcctcgcactgggctgcgctgtctcaagcc
gcgaccaaccggaccgctgatgacgggcgtgccgtggttgatgtgtcgattcgcagccat
ccgcaatacggcctcctccggctgcttcaaagttccggccttgatgctgaccggatcggc
gagatcccggagatcggtcatatcggttccgaaatgacggcgcggcgggaccttgtatcc
gcggcacttctgccggcggcttgcaccgaggcctggggcgaagcggggtttctgccagat
ccatcagttgttcagtccggttttgaacaggtcagcctgattgaggccgccaatgagcgc
gaggaagccgcggcgcttgccgccgccatgcgccgcgcacttgagccaggttcgggcaat
cctgaacccaccgcggctctgatcacatctgatcgcaatctggcgcgtcgggttgtcacc
gaacttggccgctacgggatcgaagccaatgattcgggcggtgtgccattggcatcaagc
ccgcagggcggtctggcgcggctggttgtgcaggtgggttttgcgccgggcgatccggtg
gcgattgcagcacttatcaagcaccccttggcgcgttttggcctgactgcccaagaggcg
aaactccgcgccggcatggtcgagcgcatcggcctgcgcggcggcagtggcgcagctgat
atcaactctcttgaagaacttgtgaggaaacgcgatcccggacggcatgaccgtcatgcg
ccgcactggctcagcaggatcagcgacgaggacgcaagcctcgccgtcgattttgccggt
cgcgtcaccgaggcgctgtcgccgctgacctcgatgctggccgagacgaccgaaagtgcc
atcggccggtttgccggcttgaccgcagccgtgctggagcggatttgcgccgatgacact
gcggcgctcgatggtctctggggcgatgaagcaggcgccgacctggccagccttttgctc
gagacccgcgacagcggctcgaccctggcgatgtccgggcatgaatggatcgacacgctg
gacgcgctgatggccggcagaatggtcaagccgcgcgccggcggacatccccgtgctttc
atctggggcgcactcgaggcccggttgcagcatgtcgacacgctgctattgggcggtctc
aacgagggtgtctggccacaggccggtcaggaagatccgtttttatcgcgctcgatgaaa
gcggcgatcgggctggaaccgccggagcggcggattggccaggcagcgcatgatttccaa
atggccatgggcgcacccgttgtggtgctgtcgcggtcgctgcgttcgggcaaggctccg
acggtggcatcgcgctggcttcagcggcttctggccgttgtcgggcctgaaccggccaag
gcgctcaagcacagaggcgatgcgctccttgcccatgcgcggtcgctggatcagggcccg
tcgacggctcccgcctcgcgcccggagccatgtccgcccgctgatcttcagcccaaaagc
tattccttctccgaggtcggcaagctgcgccgcgatccctatgcgatctatgcgcgccgc
gtgctcaagcttgatccgctcgagccctttctcgcggatcccgggccgcgcgaacgcgga
acactctaccatgcgatcctcgaagaattcatttcgtccacggaacgaagtgatcggaca
cagcaaaccctgcagggcatcgcagcaaagcatttcgcccgcgcacagttgccggacgcc
accgcattggtctggcggatgcgcttcgacaaggcggcgcgcttcattgccgagtgggaa
gcgggtgcagccgatggcctggttcgctccctcgttgagacccgcgccagtctggaactg
ccaggtgccggggtgaaactcaccggcatggccgaccggattgatctgcgcaaggacaaa
accgcctggatcatcgactacaagaccggcggcacgccatcgcgcaaggaggcccgcatc
ctgcttgatccgcaattggcgctggaagcctatgcattgatccatggcggcttttccgat
gccgggaaaataccggtgtcggggcttttctacattcgtctgactggcaaggagaaggtt
gcggaccggatcgacaccgatccggaaaagccgggcaaggacgagtttgtcggtccggaa
gatcttggcgtcaaagccgttgaggaacttggccggctggtaaacttgctccgctccggc
aagcgcgggttcctctcgcgcgccattccgcagagcgcccgcgattttggcggcgaatat
gatcatctcgcccgtgtcgccgaatggcagaccgctgtcgatgcagaaggaggcgacggc
gatgacggctga
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