Hoeflea sp. IMCC20628: IMCC20628_04223
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Entry
IMCC20628_04223 CDS
T03926
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
hoe
Hoeflea sp. IMCC20628
Pathway
hoe03030
DNA replication
hoe03430
Mismatch repair
hoe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hoe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
IMCC20628_04223
03430 Mismatch repair
IMCC20628_04223
03440 Homologous recombination
IMCC20628_04223
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hoe03032
]
IMCC20628_04223
03400 DNA repair and recombination proteins [BR:
hoe03400
]
IMCC20628_04223
Enzymes [BR:
hoe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
IMCC20628_04223
DNA replication proteins [BR:
hoe03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
IMCC20628_04223
DNA repair and recombination proteins [BR:
hoe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
IMCC20628_04223
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
Rv2179c-like
GIT_SHD
Motif
Other DBs
NCBI-ProteinID:
AKI02900
UniProt:
A0A0F7PTK6
LinkDB
All DBs
Position
complement(4463335..4464027)
Genome browser
AA seq
230 aa
AA seq
DB search
MREIVFDTETTGLSNQTDRIIEIGCIELENQFPTGRTLHLFINPDGCKVHPDALAIHGIT
DAFLADKPVFSAVAQQIAEFFEGAHYVAHNASFDMGFLNAEYTRIGRPAISPDLVIDTLS
LARRRHPMGPNSLDALCRRYGIDNSHRNKHGALLDAELLTDVYIEMNGGRQAALGLSTDE
VVSVERDADEEVVEIGERLRPLPPRLSAVELEAHAKLIARIGGDALWNKA
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgagattgtcttcgatacggaaaccaccggactgagcaaccagaccgaccgaatc
atcgaaatcggctgcatcgagctcgaaaaccagtttcccaccggacggacattgcatctg
ttcatcaatcccgatggctgcaaggttcatcccgatgcgctcgcgatacacggcattacc
gatgcgtttctcgccgacaaaccggtgttcagcgccgtggcgcagcaaatcgccgaattt
tttgagggcgcgcactatgttgcgcacaacgccagtttcgacatgggatttctcaacgcc
gaatacacccggattggccgccccgctatctcgccagatctggtgatcgataccctttca
cttgcccgcaggcgccatccgatggggcccaacagccttgatgccctgtgccggcgctac
ggcatcgacaattcccatcgcaacaagcacggggcgcttctcgatgcggaattgctgacc
gatgtctatatcgagatgaatggcggccgccaggcagcactcggactgtcgactgatgag
gttgtctctgtcgaacgggacgctgatgaagaggttgtcgaaatcggcgagcggttgcga
ccgttgccaccgcgcctgagtgccgtcgagcttgaagcgcatgcaaaactgattgcccgg
atcggcggcgacgccctgtggaacaaggcctga
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