Hoeflea sp. IMCC20628: IMCC20628_04491
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Entry
IMCC20628_04491 CDS
T03926
Name
(GenBank) RNA polymerase sigma factor, sigma-70 family
KO
K03089
RNA polymerase sigma-32 factor
Organism
hoe
Hoeflea sp. IMCC20628
Brite
KEGG Orthology (KO) [BR:
hoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hoe03021
]
IMCC20628_04491
Transcription machinery [BR:
hoe03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
IMCC20628_04491
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
UCR_14kD
HTH_31
HTH_3
Rv0078B
Motif
Other DBs
NCBI-ProteinID:
AKI03163
UniProt:
A0A0F7PQQ1
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Position
4719385..4720254
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AA seq
289 aa
AA seq
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MVTKAITANRQMVRAAMAAPYLERDQEHDLAVRWKDNKDQEALHQITMAHMRLVISMAAK
FRNYGLPMSDLIQEGHVGLLEAAARFDPEREVRFSTYATWWIRASVQDYVLRNWSIVRGG
TSSAQKSLFFNLRRLRMRLAQDDPDMTESAIHTKIADTLGVRAKDVAVMDARLSGSDSSL
NAPMSNGESGGSSDRMDFLKSDEPLPDEQVSTMIDEERRHLWLSDALDTLNPRELRIIRE
RRLAEDGATLESLGAVLGISKERVRQIENRALEKLRMVLTTRTPEIASL
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atggtcacgaaagctatcacagcaaatcggcaaatggttcgtgccgccatggctgcccct
tatcttgaacgcgaccaagagcatgatctggctgtgcgctggaaagacaacaaggaccag
gaggcgctccaccagatcaccatggcgcatatgcggctggtgatttcgatggcggcaaaa
ttccgcaactacggtttgccgatgagcgatctgatccaggaaggccatgtaggactgctg
gaggcggccgccaggttcgaccccgagcgcgaggtccgcttctccacctacgccacctgg
tggatcagggcatcggttcaggattatgtcttgcgcaactggtcgatcgtgcgtggaggc
accagttctgcgcagaagtcgctgtttttcaatttacgccggttgcggatgcggctggcg
caagacgatcccgatatgacagagagtgcgatccataccaagatcgccgatacacttggc
gttcgcgccaaggatgtggcggtaatggacgcgcggctgtccgggtcggattcatcgctg
aacgcaccaatgtcaaacggcgagtcgggcgggtcctcggaccggatggactttctcaaa
agcgacgaacctttgcccgatgagcaggtttcaacgatgattgacgaggaacgtcgtcat
ctctggctcagcgatgcgctcgacaccctcaatccgcgtgaattgcgcatcattcgagag
cgccgactggccgaagatggagcgacgcttgaatcgctcggcgcggttctgggtatttcc
aaggagcgggtgcgccagatcgagaatcgggcgcttgaaaaattgcggatggtgctgaca
acacggaccccggaaatcgccagtctctga
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