Hoeflea sp. IMCC20628: IMCC20628_04524
Help
Entry
IMCC20628_04524 CDS
T03926
Name
(GenBank) DNA polymerase III epsilon subunit-like 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
hoe
Hoeflea sp. IMCC20628
Pathway
hoe03030
DNA replication
hoe03430
Mismatch repair
hoe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hoe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
IMCC20628_04524
03430 Mismatch repair
IMCC20628_04524
03440 Homologous recombination
IMCC20628_04524
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hoe03032
]
IMCC20628_04524
03400 DNA repair and recombination proteins [BR:
hoe03400
]
IMCC20628_04524
Enzymes [BR:
hoe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
IMCC20628_04524
DNA replication proteins [BR:
hoe03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
IMCC20628_04524
DNA repair and recombination proteins [BR:
hoe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
IMCC20628_04524
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
BRCT
DUF3638
Motif
Other DBs
NCBI-ProteinID:
AKI03194
LinkDB
All DBs
Position
4752831..4753709
Genome browser
AA seq
292 aa
AA seq
DB search
MNLNFAVVDVETANENFSSICSIGVAKFRAGKLVDEHYTLVNPETYFSNTYIHGIDISHV
EDAPKLAEGLTMLSAWLSDDYARTVCHMPFDKTATTRAADKVSMNWDHINWHDSARAVKL
AWPEYRQSGYGLKKIAKVLGIEFEHHNALADAKAAGEVLLAAAKIIDESKASLWEQISQD
KATRARLNYLKNVTDKPIANPEGEFFGQGVCFTGTLPNMTRKEASAFAAAFGFDIQGSVN
SKCNILVIGAIDESKLSEGATKTGKWAKAEARIEKGEELRIMSPKDFEALFA
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgaatttaaatttcgcagttgttgatgttgagactgccaacgagaatttttcttctata
tgttctattggggtggccaagtttagagcaggaaaattggttgatgagcattatacgctc
gtgaatccagagacttatttctcaaacacttacattcatggcattgacatctcgcatgtc
gaagacgcgccaaaattggccgaaggtttgactatgcttagcgcttggctatcagacgat
tacgcacgaacagtctgccacatgccatttgataagacggccactacgagagcggcagat
aaagtcagtatgaattgggatcatataaattggcatgacagcgcgagagcggtaaagctt
gcttggccagagtatagacaaagtgggtatggtctcaaaaaaattgccaaagttctgggt
atagaatttgagcatcataatgcgcttgccgatgcaaaggccgctggtgaagtgttgcta
gcggccgcgaagataatagatgaaagcaaggccagcctttgggagcaaatatcgcaggac
aaagccacgcgcgcgcgcctgaattacctaaaaaatgtgactgataaaccgattgcaaat
ccagagggtgagttcttcggacagggcgtttgctttactggcactctaccaaatatgacg
cgaaaagaagcctctgccttcgccgctgcgttcggttttgatattcaagggtcggtcaac
tcgaaatgtaatattttggtaattggtgcaatagatgagagcaaactttctgaaggagca
accaaaacaggcaaatgggcaaaggcagaagcgcgaatagaaaaaggcgaagaattgcgg
ataatgagccctaaagactttgaagcgttatttgcctag
DBGET
integrated database retrieval system
