Hoeflea sp. IMCC20628: IMCC20628_04764
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Entry
IMCC20628_04764 CDS
T03926
Name
(GenBank) DNA polymerase III epsilon subunit-like 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
hoe
Hoeflea sp. IMCC20628
Pathway
hoe03030
DNA replication
hoe03430
Mismatch repair
hoe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hoe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
IMCC20628_04764
03430 Mismatch repair
IMCC20628_04764
03440 Homologous recombination
IMCC20628_04764
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hoe03032
]
IMCC20628_04764
03400 DNA repair and recombination proteins [BR:
hoe03400
]
IMCC20628_04764
Enzymes [BR:
hoe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
IMCC20628_04764
DNA replication proteins [BR:
hoe03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
IMCC20628_04764
DNA repair and recombination proteins [BR:
hoe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
IMCC20628_04764
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AKI03430
LinkDB
All DBs
Position
unnamed2:complement(join(123282..123420,1..842))
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AA seq
326 aa
AA seq
DB search
MTSQLDFFAAPVLSATTKVAKPQAVAGREQGGFSFDDEAMAHHLEETGNYRILRRLSPRS
VVEHARPEFSRQGVFLDTETTGLNYRSDEIIEIGVVAFSFNDAGDIGDVTGVYGGLQQPT
IPIPAEITRLTGITDDMVAGRAIDASRLKYFIEPADLIIAHNAGFDRPFCEAFSPMFCNK
PWACSVSDIDWSARGFEGSKLGYLIGQSGYFHDGHRAVDDCFALLEVLGQTRPGSITTPF
AELHQASQRSRVRIYAENSPFDMKDHLKARGYRWSDGSDGRPKSWWVELPEEKLDEELHF
LRTEIYGWDADPPVKHLTAVDRFRAV
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgacctcgcaactcgacttctttgcagctcctgttttgtcggccaccacgaaagtggcc
aagccgcaggctgttgctggaagggaacaaggcggcttcagttttgatgatgaggccatg
gcccaccatctggaagagaccggaaactaccgcatcttgcgaaggctctcgccccgatca
gttgtcgagcatgctcgacccgaattttcacggcagggagtgtttctcgacacggaaact
accggcctcaactaccgatccgacgaaatcatcgaaatcggtgtagtcgctttcagcttc
aatgacgcaggtgacattggcgatgtcactggcgtctatggcggacttcagcagccgaca
attcccatcccagccgaaatcacacggctgaccggcattaccgacgacatggtcgccggt
cgggcgatcgacgctagccgcctgaaatacttcattgagccggctgacctgatcattgct
cacaacgccggtttcgaccggcccttttgcgaagcattttcaccgatgttttgcaacaag
ccctgggcttgttcggtttccgatatcgattggtcggcgcgcggctttgagggaagcaaa
ctcgggtacctgatcggccagtcgggatattttcacgatgggcaccgcgctgtcgacgat
tgtttcgcgctgttggaagtgctcgggcagacacggcccggttcgataacaacgccgttt
gcggagctccatcaagccagccagcggtcacgggtccgcatttatgcggagaattcccca
ttcgacatgaaggatcatctcaaggcgcgcggctatcgctggtcggacggctccgatggg
cgcccgaaatcctggtgggtggagttgcccgaagagaagctcgacgaggagctgcatttc
ctgcggacagagatttatggctgggatgccgatccaccggtcaagcatctgacggcggtc
gatcgcttccgggcggtttga
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