KEGG   Haliangium ochraceum: Hoch_0716
Entry
Hoch_0716         CDS       T01103                                 
Name
(GenBank) Exonuclease RNase T and DNA polymerase III
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
hoh  Haliangium ochraceum
Pathway
hoh03030  DNA replication
hoh03430  Mismatch repair
hoh03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:hoh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Hoch_0716
   03430 Mismatch repair
    Hoch_0716
   03440 Homologous recombination
    Hoch_0716
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hoh03032]
    Hoch_0716
   03400 DNA repair and recombination proteins [BR:hoh03400]
    Hoch_0716
Enzymes [BR:hoh01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Hoch_0716
DNA replication proteins [BR:hoh03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Hoch_0716
DNA repair and recombination proteins [BR:hoh03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Hoch_0716
SSDB
Motif
Pfam: RNase_T Rv2179c-like RNase_H_2 DNApol_Exo
Other DBs
NCBI-ProteinID: ACY13344
UniProt: D0LMX3
LinkDB
Position
935962..936504
AA seq 180 aa
MQPLVFIDCETTGLDPERHEILEIAAIRVHPQTLDEERELVLRVRPERLEDADPEALEVN
GYRRRAWADAVSLGDAMAELAPMLEGAVLAGHNVAFDRRFLEVAWDCVGHRPETLDHHAL
DTAALAFPLLMAGEIDSLSLTPVCAHLGVLRGEEHWAFDDVRACLGVARRLLPAMLAGLA
NT seq 543 nt   +upstreamnt  +downstreamnt
atgcagccgctcgtgttcatcgactgcgagaccaccgggctcgacccggaacggcatgaa
atcctcgagatcgcggcgatccgtgtgcacccgcaaacgctcgacgaagagcgcgagctg
gtgctgcgtgtgcgccccgaacgcctcgaagacgccgaccccgaagcgctcgaggtcaac
ggctatcgccggcgggcctgggccgacgcggtgtcgctgggcgatgccatggccgagctc
gccccgatgctcgaaggcgccgtgctcgccggccacaacgtggccttcgaccggcgcttt
ctcgaggtggcctgggactgtgtcggacaccgtcccgaaaccctcgaccaccacgcgctc
gacacggccgcgctggccttccccttgctcatggccggggagatcgactcgctctcgctc
acgcccgtgtgcgcccacctgggcgtgctccgcggcgaggagcactgggccttcgacgac
gtgcgcgcctgcctcggcgtcgcccggcgcttgctgccggccatgctcgcggggctggcg
tga

DBGET integrated database retrieval system