Haliangium ochraceum: Hoch_1728
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Entry
Hoch_1728 CDS
T01103
Name
(GenBank) sigma54 specific transcriptional regulator, Fis family
KO
K12266
anaerobic nitric oxide reductase transcription regulator
Organism
hoh
Haliangium ochraceum
Brite
KEGG Orthology (KO) [BR:
hoh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hoh03000
]
Hoch_1728
Transcription factors [BR:
hoh03000
]
Prokaryotic type
Helix-turn-helix
Other families
Hoch_1728
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
HTH_30
AAA_2
Mg_chelatase
HTH_28
HTH_23
AAA
Motif
Other DBs
NCBI-ProteinID:
ACY14277
UniProt:
D0LXS2
LinkDB
All DBs
Position
2350210..2351910
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AA seq
566 aa
AA seq
DB search
MTIETQQSTTQPHDAGVTTRIEPPRSASRGPVPVLTIVHHPLLLRIGERALLSEMVAGRA
ARIARLSPRFAAPGKPRGEPLLDPHLSRTPFLLRLLPDGAIELSPGDSRTRIEVAGERVN
APRRFSVAAVEDGVVLELGGRIALLLHLYTHHDEGTGDELGFIGASAALSRVREDVRRIA
DLDVPVLVRGETGTGKELVANAIHATSPRRGRPLVSVNLAALPGSLAAAELFGASRGAYT
GATRARDGYFRRAHCGTLFLDEIGETPVDVQVMLLRALETGEIHALGGQRADRVDVRVIA
ATDADLDELVDGGQFRAPLLHRLAAYEIHVPPLRVRRDDIGRLLIAFLEQGLDETGEAKR
LAREDGAPWLSMGLMTRLVRYDWPGNVRQLRNAARQIVIASRGSDEATLPDALRRQLGRA
GRGALAAAERRPGASAQGSVEHSGDEDESGRESSVARVVTRPYRSVRAGASRPRKRPAEL
GEREILDALHAHRWNIKSTATALGISRTSLYQRIDASTRMRTAGAIDADEIRACFRDSGG
DLELMVEHLRVSKPALRRRIRELGLA
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgaccatcgagacccagcagagcaccacgcaaccgcatgatgccggcgtcaccacgcgt
atcgagccgccgcgttcggcatctcgcgggccggttccggttctcaccatcgttcatcat
cccttgctgttgcgcatcggcgagcgcgcgctcttgagcgagatggtggccggacgcgcg
gcccgcatcgcgcgtctgtcgccgcgcttcgccgcgcccggcaagccccgcggcgaaccc
ctgctcgacccgcatctgagccgtacgccctttcttttgcggctgctgcccgatggcgcg
atcgagctctcgcccggggacagccgcacgcgaatcgaggtcgcgggcgagcgcgtgaac
gcgccgcggcggttttcggtcgccgcggtcgaagacggcgtggtgctcgagctgggcggt
cgcatcgcgctgctgctgcacctctacacccatcacgacgagggcacgggcgacgagctg
ggcttcatcggcgccagcgcggcgctctcgcgcgtgcgcgaggacgtgcgtcgcatcgcc
gatctcgacgtgccggtgctggtgcgcggcgagaccggcaccggcaaggagctggtggcc
aacgccatccacgccaccagtccgcgccgcggccggccgctggtgagcgtcaacctggcc
gcgctgccgggctcgctggcggcggccgagctcttcggcgccagccgcggcgcgtacacc
ggcgcgacgcgcgcgcgcgatggctatttccgccgcgcccactgcgggaccttgttcctc
gacgagatcggcgagaccccggtcgacgtccaggtgatgctgttgcgcgcgctcgagacc
ggcgagatccacgcgctgggcgggcagcgcgccgatcgcgtggacgtgcgcgtgatcgcg
gcgaccgacgccgatctcgacgagctggtggacggcggccagtttcgcgcgccgttgctg
catcgcctcgcagcctacgagatccacgtgccgccgctgcgcgtgcgccgcgacgacatc
ggccgcttgctgatcgcctttctcgagcagggtctggacgagaccggcgaggccaagcga
ctggcgagagaggacggggcgccgtggctgtcgatgggattgatgacccgcctggtgcgt
tacgactggcccggcaatgtgcgccagttgcgcaacgcggcccggcagatcgtcatcgcc
agtcgcggcagcgacgaggccacgctgcccgacgccctgcgccgacagctcgggcgggcg
ggtcgcggcgcgctggcggcggccgagcgtcgccccggcgcgagcgcccagggctcggtc
gagcacagcggcgacgaggacgagagcggccgcgagagcagcgtcgcgcgggtcgtgacc
cggccctatcgcagcgtgcgcgcgggcgcgtcccggccgcgcaagcgaccggccgagctc
ggcgagcgcgagatactcgacgccttgcacgcgcaccgctggaatatcaagtcgacggcg
acggcgctgggaatctcgcgtacctcactgtatcagcgtatcgacgcctccacgcgaatg
cggacggcgggcgcgatcgacgctgacgaaatccgcgcttgttttcgcgattctggcggc
gatctcgagctcatggtcgaacatctgcgggtttccaagcccgcgttgcggcgtcgaatc
cgggagttgggtctggcataa
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