Haliangium ochraceum: Hoch_1832
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Entry
Hoch_1832 CDS
T01103
Name
(GenBank) TIM-barrel protein, yjbN family
KO
K05539
tRNA-dihydrouridine synthase A [EC:1.-.-.-]
Organism
hoh
Haliangium ochraceum
Brite
KEGG Orthology (KO) [BR:
hoh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hoh03016
]
Hoch_1832
Transfer RNA biogenesis [BR:
hoh03016
]
Prokaryotic type
tRNA modification factors
Dihydorouridine synthases
Hoch_1832
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Gene cluster
GFIT
Motif
Pfam:
Dus
His_biosynth
PcrB
Motif
Other DBs
NCBI-ProteinID:
ACY14380
UniProt:
D0LY25
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All DBs
Position
2524022..2525152
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AA seq
376 aa
AA seq
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MQPVNSAKQSPEPVPGAAAAAAAKAADADTGVAERRGVTAALSVAPMMECTDRHFRYFLR
QISRHTLLYTEMIVTGTIIHGDRPRYLDFSEAEHPIALQLGGDDAEALATCARIAEDWGY
DEVNLNVGCPSSRVSSGSFGACLMARPEVVARAVEAMRAAVAIPVTVKHRIGIDDRDRYE
DMREFVRVVAEAGADRFSVHARKAWLSGLSPKENREVPPLRYADVHRLKREFPHLPIEIN
GGIVDLDSAQEQLAHVDAVMIGRAAYNTPWIFAEADARFFGSVAPTPTQTAVVEAMIDYV
EAQRGRGVPLHRITRHMFQLFAGQRGARGWRRYLTEQAKSRDAGPEVLRVALDRFLAASL
PPAPAPETESIAASAG
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgcagcccgtgaactctgccaagcaatcgcctgagccggttccgggcgccgcggccgcg
gctgcggctaaggccgcggatgcggacacgggcgtcgccgagcggcgcggtgtcaccgcg
gcgctcagcgtcgcgcccatgatggagtgcaccgaccggcacttccgctatttcctgcgc
cagatctcgcggcacacgctgctgtacaccgagatgatcgtcaccgggaccatcatccac
ggcgaccggccgcgctatctcgacttctccgaggccgagcatcccatcgcgctgcagctc
ggcggcgacgacgccgaggccctggccacctgcgcgcgcatcgccgaggactggggctac
gacgaggtcaacctcaacgtcggctgtccctcgagccgggtgagcagcggcagctttggc
gcgtgtctgatggcccgccccgaggtcgtggcgcgcgcggtcgaggccatgcgcgcggcc
gtggccatcccggtgacggtcaagcaccgcatcggcatcgacgatcgcgaccgctacgag
gacatgcgcgagttcgtacgcgtggtcgccgaagccggcgccgaccgcttctcggtgcac
gcgcgcaaggcctggctgagcgggctctcgcccaaggagaaccgcgaggtgccgccgctg
cgctacgccgatgtgcaccgcctcaagcgcgagtttccccacctgcccatcgagatcaac
ggcggcatcgtcgacctcgacagcgcccaggagcagctcgcccacgtcgacgcggtcatg
atcggacgcgcggcctacaacacgccgtggatcttcgccgaggccgacgcgcgcttcttc
ggcagcgtcgcgccgacgccgacacaaacggccgtggtcgaggccatgatcgactacgtc
gaggcgcagcgcggccgcggcgtgcccctgcaccgcatcacgcgccacatgtttcagctc
tttgccggtcagcgcggggcccgcggctggcgccgctatctcaccgagcaggccaagagc
cgcgacgccgggcccgaggtgctgcgcgtcgccctggaccgcttcctggccgcgtcgctg
ccgcccgcgcccgcgcccgagaccgagagcatcgctgcgtcggccggctga
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