Haliangium ochraceum: Hoch_1895
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Entry
Hoch_1895 CDS
T01103
Name
(GenBank) Lytic transglycosylase catalytic
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
hoh
Haliangium ochraceum
Brite
KEGG Orthology (KO) [BR:
hoh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hoh01011
]
Hoch_1895
Enzymes [BR:
hoh01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
Hoch_1895
Peptidoglycan biosynthesis and degradation proteins [BR:
hoh01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
Hoch_1895
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GFIT
Motif
Pfam:
SLT
LysM
LysM3_LYK4_5
DUF7382
Motif
Other DBs
NCBI-ProteinID:
ACY14442
UniProt:
D0LYX2
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All DBs
Position
complement(2604400..2606481)
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AA seq
693 aa
AA seq
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MHITPSTAPPAALTTPAPSPAERARPTLRRAVRLALGLAFALAPVHALAEPQNDALPLAP
GTQLVPPGPGSPAVAPLETDPGQRRAIRGCEVEDNCRGHALTGLREFELEAFGPGPGEPG
LPWLDDPYGHERASRGRGVARARTVARPSELRPDLPWLDELELPDLPVRWHERVIRYLEF
YKDDPRGRNIMRAWLRRQGRFRALIVERLRRAGLPEDLLYVAMIESSYDPHTRSRVGAGG
LWQFMPAGGRIYGLWIDRWIDERSDPVRSTEAACLYFADLYQRFGDWHLALAAYNAGYGA
ILRSVTRYNTNDYWRLLEYENALPWGTSLYVSKTMAAAIVGRNRAFFGFEDIDEAEPMRW
DEVSVPKSVPLGAIARAAGASVEVIQELNPQLHRKRTPPTMSGYVMRVPAGSGPLFATRY
PQLRGDWDRYDAYVVAHGERIEDIATVHGISRRKLMSLNGIEHESEIAGGMVLVVPRLSD
EDKAKNRAEAEEDLYSSGVPPAVDDELMLVAVPDRDAHIPGKRRVFYRVVTGDSMSQVAH
AFGVSLRDLALWNDLGAGAHLHPRMVLQAFVDQDWDGNSAEGAPVALLDDSRLLVVTRGS
EEHIALMEQRIGRERIIYTPEKPESFETIGRKFGLDSRDMARINSRPHDTVVEPGEEVVV
YKVVDKERSPRAADQAKAKRRSEARRKRGKSKN
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgcacatcaccccatcgacagcgccgcccgccgcgctcacgacaccagcgccatccccg
gcggagcgcgcgcggcccaccctgcgccgagccgtgcggctggcgctgggcctggcgttc
gcgctcgctcccgtgcatgccctggccgagccgcagaacgacgccctcccgctggccccg
ggcacgcaactggtgccgccgggcccgggctcgcccgcggtcgccccgctcgagaccgac
cccggccagcgccgcgccatccgcggctgcgaggtcgaggacaactgccgcggccacgcg
ctcaccggcctgcgcgagttcgagctcgaggcctttggcccaggcccgggcgagcccggc
ttaccctggctcgacgacccctacggccacgagcgcgcatcccgcggtcgcggcgtggcg
cgtgcgcggacggtcgcccgccccagcgagctgcgccccgatctgccctggctcgacgag
ctcgagctgcccgatctgccggtgcgctggcacgagcgcgtgatccgctatctcgagttc
tacaaagacgatccccgcggccgcaacatcatgcgcgcctggctgcgccgccagggccgc
ttccgcgcgctcatcgtcgagcgcctgcgccgcgccggtctgcccgaggacctgctgtac
gtggccatgatcgagtcgtcttacgacccgcatacgcgctcacgcgtgggcgctggcggg
ctgtggcagttcatgcccgcgggcggtcgcatctacgggctgtggatcgatcgctggatc
gacgagcgcagcgacccggtgcgctccaccgaggccgcgtgcctgtacttcgccgatctg
taccagcgcttcggcgactggcatctcgctctggccgcctacaacgccggctacggcgcc
atcctgcgcagcgtgacccgctacaacaccaacgactactggcgcctgctggagtacgaa
aacgcgctgccctggggcaccagcctgtacgtgtccaagaccatggccgccgccatcgtc
ggccgcaatcgcgccttcttcggcttcgaggacatcgacgaagccgaacccatgcgctgg
gacgaggtctcggtgcccaaatccgtgccgctcggcgccatcgcgcgcgcggccggcgcc
agcgtcgaggtcatccaggagctcaatccccagctccaccgcaagcgcacgccgccgacc
atgagcggctacgtgatgcgcgtccccgccggcagcggcccgctgttcgccacccgctac
ccgcaactgcgcggcgactgggatcgctacgacgcctacgtggtcgcccacggcgagcgc
atcgaggatatcgccacggtgcacggcatctcgcgccgcaagctgatgtcgctcaacggt
atcgaacacgagtccgaaatcgccggcggcatggtcctggtggtgccccggctcagcgac
gaggacaaggccaagaaccgcgccgaggccgaggaagacctgtacagctcgggcgtgccg
ccggccgtggacgacgagctcatgctggtcgcggtgcccgatcgcgacgcccacatcccg
ggcaagcggcgcgtgttctaccgcgtggtcacgggcgacagcatgtcccaggtggcccac
gcgttcggcgtgtccctgcgcgatctggcgctgtggaacgatctcggcgcgggcgcccac
ctgcacccgcgcatggtgctgcaggccttcgtcgatcaggactgggacggcaacagcgcc
gagggcgcgccggtcgcgctgctcgatgacagccgcctgctcgtggtcacccgcggctcc
gaggagcacatcgcgctcatggagcagcgcatcggccgcgagcgcatcatctacacgccc
gagaagcccgagtccttcgagaccatcggccgcaagttcggtctcgacagccgcgacatg
gcgcgcatcaacagccgcccgcacgacaccgtggtcgagcccggcgaggaggtcgtggtg
tacaaggtagtggacaaggagcgctcgccgcgcgcggccgaccaggccaaggccaagcgc
cgcagcgaagcccgccgcaaacgcggcaagagcaaaaactag
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