Haliangium ochraceum: Hoch_2135
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Entry
Hoch_2135 CDS
T01103
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing)
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
hoh
Haliangium ochraceum
Brite
KEGG Orthology (KO) [BR:
hoh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hoh03032
]
Hoch_2135
03400 DNA repair and recombination proteins [BR:
hoh03400
]
Hoch_2135
Enzymes [BR:
hoh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Hoch_2135
DNA replication proteins [BR:
hoh03032
]
Prokaryotic type
DNA Topoisomerases
Hoch_2135
DNA repair and recombination proteins [BR:
hoh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Hoch_2135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
WIYLD
Motif
Other DBs
NCBI-ProteinID:
ACY14680
UniProt:
D0LGV8
LinkDB
All DBs
Position
complement(2959632..2961995)
Genome browser
AA seq
787 aa
AA seq
DB search
MATKRRRSKKSSKSDAPSGTDDYMGGGELDASLQAEARRRYLNYALSVITARALPDVRDG
LKPVQRRILYAMQADEKLSHEAKHKKSAKVVGAVIGRYHPHGDTAVYDAMVRMAQPFSLR
LPLVDGSGNFGSLDGDSPAAYRYTEARLTAAAMQLLDELKYATVPFRANYDATAEEPTVL
PARFPNLLVNGSTGIAVGMATNIPPHNLRELTKALIALADDPELNVSGLLKYIKGPDFPT
GGQILNSKAELREIYEEGRGAIRVRGEYKLETQKRSKILVVTSVPYGVTKATVVERIAEV
IIKRKLPQLLDVRDESTTDVRVVLEIKKDADPEMIMAYLFKHTPLQLNFNVNLTCLVPSG
NDASQPAQLGLKDMLRHFLDFRYEVTERRYQFELAALLRRIHILEGFVVIFDALDETIRI
IRRSDGRQDAAQKIMKKFGLDKEQVDAILELRLYRLAKLEINIIREELADKRSQAKSIEA
ILRSEKKLWGVVKTELGEVAELLGDARRTKTGGAAAELEFDADAYIIDEDAHVVLTRDGW
LKRQRELKDPTSTRLREGDEVMAVLAGSTKEHVAFFTNYGSAYVIKIYDVPATSGYGDPV
QKLFKFKDGERIVAAMAFDPRAMPPDELLTVSSGGFGQRFASEPFTQPTTRAGRKFARPP
KGDEIVDVVATEEDDIVVVATRKGYTLACRSGEINKLENPGKGVTVIKTGEHDKVIGFIS
GGRRAEALYVESAKGGRTFELHAVAQRLTTRGGKGHQLVKRSTLKLTPQTAELPPPLANN
EGNKEVH
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atggccacgaagcgacgacgctccaagaagtcctccaagagcgacgcccccagcggaacc
gacgactacatgggcggaggcgaactcgacgcctcgctccaggccgaggcccggcgccgc
tacctcaactacgcgctgagcgtcatcaccgcgcgcgccctgcccgacgtgcgcgacggc
ctcaagccggtgcagcggcgcatcctctacgccatgcaggccgacgagaagctgtcgcac
gaggccaaacacaaaaagagcgccaaagtcgtcggcgccgtcatcggccgctatcacccg
cacggcgacaccgccgtgtacgacgccatggtgcgcatggcccagcccttctcgctgcgc
ctgcccctggtcgacggctcgggcaacttcggctccctcgacggcgacagcccggccgcc
taccgctacaccgaggcccggctcacggccgccgccatgcagctcctcgacgagctcaag
tacgcgaccgtgcccttccgcgccaactacgacgccaccgccgaagagcccacggtgctg
ccggcgcgcttccccaacctgctggtcaacggctccaccggcatcgccgtgggcatggcc
accaacatcccgccgcacaacctgcgcgagctcaccaaggcgctgatcgccctcgccgat
gaccccgagctgaacgtgagcgggctgctcaagtacatcaagggccccgacttccccacg
ggcggccagatcctcaacagcaaggccgagctgcgcgagatctacgaggagggccgcggc
gccatccgcgtgcgcggcgaatacaagctcgagacccagaagcgcagcaagatcctggtc
gtgacctcggtgccctacggcgtcaccaaggccaccgtggtcgagcgcatcgccgaggtc
atcatcaagcgcaagctgccgcagctcctcgacgtgcgcgacgagtcgaccaccgacgtg
cgcgtcgtgctcgagatcaagaaagacgccgatcccgagatgatcatggcgtacctgttc
aagcacacgccgctgcagctcaacttcaacgtcaacctcacctgcctggtgccgagcggc
aacgacgccagccagccggcccagctcgggctcaaggacatgctgcgccacttcctcgac
ttccgctacgaggtcaccgagcgccgctaccagttcgagctggccgccctgctgcggcgc
atccacatcctcgagggcttcgtggtcattttcgacgccctggacgagaccatccgcatc
atccgccgcagcgacggccgccaggacgcggcgcagaagatcatgaagaagttcggcctc
gacaaagagcaggtcgacgccatcctcgagctgcgcctgtatcgcctggccaagctcgag
atcaacatcatccgcgaagagctggccgacaagcgctcgcaggccaagagcatcgaggcc
atcctgcgcagcgagaagaagctctggggcgtggtcaaaacagagctcggcgaggtcgcc
gagctgctcggcgacgcgcgccgcaccaagaccggcggcgccgcggccgagctggagttc
gacgccgacgcctacatcatcgacgaagacgcccacgtggtgctcacgcgcgacggctgg
ctcaagcgccagcgcgagctcaaggacccgaccagcacccgcctgcgcgagggcgacgag
gtcatggccgtgctcgccggctcgaccaaggaacacgtcgccttcttcaccaactacggc
tcggcctacgtcatcaagatctacgacgtgcccgcgacctcgggctacggcgacccggtg
cagaagctgttcaagttcaaagacggcgagcgcatcgtcgcggccatggccttcgacccg
cgcgccatgccgcccgacgagctgctcacggtcagctccggcggctttggccagcgcttc
gcgtccgagcccttcacccagccgacaacgcgcgccgggcgcaagttcgcgcgcccgccc
aagggcgacgagatcgtcgacgtggtcgccaccgaggaggacgacatcgtggtcgtggcc
acgcgcaagggctacaccctggcgtgccgctcgggcgagatcaacaagctcgagaacccg
ggcaaaggcgtcaccgtcatcaagaccggcgagcacgacaaggtcatcggcttcatctcc
ggcggccggcgcgccgaggccctgtacgtcgagagcgccaagggcggccgcaccttcgag
ctgcacgccgtggcccagcgcctgaccacgcgcggcggcaagggccaccagctcgtcaag
cgctcgaccctcaagctcaccccgcaaacggccgagctgccgccgccgctggccaacaac
gaaggcaacaaagaggtccactga
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