Haliangium ochraceum: Hoch_2260
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Entry
Hoch_2260 CDS
T01103
Name
(GenBank) integrase family protein
KO
K03733
integrase/recombinase XerC
Organism
hoh
Haliangium ochraceum
Brite
KEGG Orthology (KO) [BR:
hoh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hoh03036
]
Hoch_2260
Chromosome and associated proteins [BR:
hoh03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
Hoch_2260
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
Tyr_recomb_halo_M
Motif
Other DBs
NCBI-ProteinID:
ACY14803
UniProt:
D0LHX4
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All DBs
Position
complement(3142761..3143948)
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AA seq
395 aa
AA seq
DB search
MDMNRDADTNCDWQRWLARFDDYLRTERGGSAHTRAAYGRDLAEFGRVYEERSGAPPVPA
QVAVLDIRAHLAGLYERNDAATMARKLSALRSFFAFLVQRGALDNNPARGVRSPKRRKAL
PRALDVDDAFRLIEAPTRAPASGADAAAASPARNVGRSGGRSANRAGATGTASAGKNKRA
KTSREPLKLRDRAIAEVLYGSGLRVGECCALDLDDIDRARLSSALVRVRRGKGGKERIVP
LGRQAVAALDAYLNVRPLLRDPKTGARDPAALFLSYRGTRLTTRSVQRMIGRNAQEVGAY
EATPHALRHSFATHLLDSGVDLRAIQELLGHASLASTQIYTKVSLDHLMNVYDASHPRAR
ASSPGTAAAPAAADGPPADAASGSASGPRKSPPDT
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggatatgaaccgagacgccgatacgaactgcgactggcagcgctggctggcgcgcttc
gatgactacctgcgcaccgaacgcggcggctccgcgcacacgcgcgccgcctacggccgc
gacctggccgaattcggccgggtgtacgaagaacgcagcggcgcgccgccggtgccggca
caggtggccgtgctcgacatccgcgcccacctggccgggctatacgagcgcaacgacgcc
gccaccatggcgcgcaagctgtcggcgctgcgctcgttcttcgcctttttggtccagcgc
ggcgcgctcgacaacaacccggcccgcggcgtgcgcagccccaagcggcgcaaggcgctg
ccgcgcgcgctcgacgtggacgacgcctttcgcctgatcgaagccccgacccgcgcgccc
gcatccggcgccgacgcggccgccgcgtccccggcccgaaacgttggccgaagcggcggc
cggagcgccaaccgcgccggcgctaccggcaccgcgagcgccggcaagaacaagcgggcc
aagaccagccgcgagccgctcaagctgcgcgatcgcgccatcgccgaggtgctctatggc
agcggcctgcgcgtcggcgagtgctgcgcgctcgacctcgacgacatcgaccgcgcgcgc
ctgtcctcggccctggtgcgcgtgcgccgcggcaaaggcggcaaagagcgcatcgtgccg
ctcggccgccaggcggtggccgcgctcgacgcctacctgaacgtgcgcccgctgctgcgc
gatcccaagaccggcgcccgcgatcccgcggccctgttcctcagctaccgcggcacccgc
ttaaccacccgctcggtgcagcgcatgatcggacgcaacgcccaagaagtcggcgcctac
gaggccacaccgcacgcgctgcgccactccttcgccacccacttgctcgacagcggcgtc
gatctccgcgccatccaggagcttctgggccacgccagcttggcctcgacacaaatctac
accaaagtgtctctcgaccatttgatgaacgtctacgacgctagccatccgcgcgcccgc
gcgtcctcgcccggcaccgccgcggcccccgccgccgccgatggacccccggccgacgcc
gcgtccgggtccgcgtccggtccgcgaaagagtccccctgatacttga
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