Haliangium ochraceum: Hoch_2472
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Entry
Hoch_2472 CDS
T01103
Name
(GenBank) DNA repair protein RecN
KO
K03631
DNA repair protein RecN (Recombination protein N)
Organism
hoh
Haliangium ochraceum
Brite
KEGG Orthology (KO) [BR:
hoh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hoh03400
]
Hoch_2472
DNA repair and recombination proteins [BR:
hoh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Hoch_2472
TLS (translesion DNA synthesis) factors
Other SOS response factors
Hoch_2472
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_29
AAA_21
DUF1484
AAA_15
AAA_22
AAA_16
Motif
Other DBs
NCBI-ProteinID:
ACY15008
UniProt:
D0LKG0
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All DBs
Position
3405733..3407550
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AA seq
605 aa
AA seq
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MLRHLRVINFAILSDVAIDFGEGFNVLTGETGAGKSLIVEAVNLLRGGRASADIPRAGAD
QAVVEAIFEVPADLALGVRRVLREAGLPRSAHDDEPEDEPDEDGNESRRADAEEDGEDGA
VPFEVLVRRVIQRGGRSRTYVNGALTTARRLAELGAWLVDLSGQHQHQGLVDPKRHRAIL
DAFADNGDARAAMLAAHEELRAAEQALQELGGDHEAVQQKIDYLRFQLEELDGAALRPGE
DAALEAERSRLSSVDKLEAGTRQAEGWIAGGEFSGWDGDSGTGVSATDLLGKAHREIERL
IAIDPALGEVAQAIDEARVVAEEAANSLRSYADKLEGDPGRLSQVEDRLALIARLVRKHG
GDLAAVLAHAGELRAQLDGLENRDERVAELEQARARAEKKAKRVAAALTATRERAAETLR
SSVAEYLAELGMASAALSVRIESKAVGADGADHVEFLLASNKGEQPKPLARIASGGELSR
IMLAVKLSLRRADEVATYVFDEVDTGIGGGTAAVVARQIRALGDQRQVLCVTHLPQIVAF
ADQHYHVSKFESDGRTETAVRSLAAKERREEMARMLGGVKITKSARAHAEAMLEEAAKSR
ARARA
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgtcacttacgcgtcatcaatttcgccatcctgtccgacgtcgccatcgacttc
ggcgaaggcttcaacgtcctcaccggcgagaccggggccggcaagtccctcatcgtcgag
gccgtcaatctgctccgcggcggccgcgccagcgccgacatcccgcgcgcgggcgccgac
caggccgtggtcgaggccatcttcgaggtgcccgcggacctcgcgctgggcgtgcgccgc
gtgctgcgggaggccgggttgccgcgcagcgcccacgacgacgagcccgaagacgagccc
gacgaggacggtaacgagagccggcgcgccgacgccgaggaggacggtgaggacggggcg
gtgcccttcgaggtgctggtgcgccgcgtgattcagcgcgggggccgcagccgcacctac
gtcaacggcgcgctgaccacggcacggcgcctggccgagctcggggcctggctcgtcgat
ctctcgggccagcaccagcatcagggcctggtcgatcccaagcgtcaccgcgccatcctc
gacgcctttgccgacaacggcgatgcccgcgccgccatgctcgcggcccacgaggagctg
cgcgctgccgagcaggcactgcaggaactcggcggcgaccacgaggccgtgcagcagaag
atcgattatctgcgctttcaactggaggagctcgacggcgccgcgctgcgtccgggcgaa
gacgctgcgctcgaggccgagcgctcgcggctcagcagcgtggacaagctcgaggccggc
acccgccaggccgagggctggatcgcgggcggcgagttcagcggctgggacggcgacagc
ggcaccggcgtctccgccaccgacctgctcggcaaagcccaccgcgagatcgagcgcctg
atcgccatcgacccggctctgggggaggtggcccaggccatcgacgaggcccgcgtggtc
gccgaagaggcagccaactcgctgcgcagctacgccgacaagctcgagggcgatcccgga
cgactgtcccaggtcgaagatcgcctggcgctgatcgcgcgcctggtgcgcaagcacggc
ggcgacctggcagccgtgctcgctcacgccggcgagctgcgcgcgcagctcgacgggctg
gagaatcgcgacgagcgcgtggccgagctcgagcaggcccgcgcgcgagcggagaagaag
gccaagcgtgtggcggccgcgctcacggccacgcgcgagcgggcggccgagaccctgcgc
agctcggtggccgagtacctggccgagctgggcatggcctcggcggcgctcagcgtgcgc
atcgagagcaaagccgtgggcgccgatggcgccgaccacgtcgagttcctgctggcgtcg
aacaagggcgagcagcccaagccgctggcgcggatcgcctcgggcggcgagctgtcgcgc
atcatgctggcggtcaagctcagcttgcggcgcgccgatgaagtcgccacctacgtgttc
gacgaggtcgataccggcatcggcggcggcacggccgcggtcgtagcgcggcagatccgc
gcgctcggcgatcagcgccaggtactgtgcgtgacccacctgccgcagatcgtcgcgttt
gccgaccagcattatcacgtctccaagttcgagagcgatggccgcacggagacggccgtg
cgctcgctcgcggccaaagagcgccgcgaggagatggcgcgcatgctcgggggcgtcaag
atcaccaagagcgcgcgcgcccacgccgaggcgatgctcgaagaagccgccaagagccgg
gcgcgcgcccgcgcttga
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