Haliangium ochraceum: Hoch_2725
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Entry
Hoch_2725 CDS
T01103
Name
(GenBank) ribonuclease Z family protein
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
hoh
Haliangium ochraceum
Brite
KEGG Orthology (KO) [BR:
hoh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hoh03016
]
Hoch_2725
Enzymes [BR:
hoh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
Hoch_2725
Transfer RNA biogenesis [BR:
hoh03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
Hoch_2725
Prokaryotic type
Hoch_2725
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
RBD-FIP
Motif
Other DBs
NCBI-ProteinID:
ACY15254
UniProt:
D0LN77
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All DBs
Position
3751779..3752651
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AA seq
290 aa
AA seq
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MLWMDQEMLTKVQAGGYSIRGVSVGGVYTSMMVSELGAMFDVGMALRSFSGADRLFLSHA
HMDHLGGLLAFLGMRGAYGVERPLEVFLPAAIAEPVQALLRAAEPLQRFPLKIATVPMEP
GQVVELRRDLSVRALRTFHPVPSLGYQFFRRVSKLRDEFRDLPGAEIGRRRRAGEDLFRE
ETHLELAYVTDTLVRVLDTEPSLLRSKVLILECTFLDQRKSLADSRAGCHIHLDELLERA
DSFENEALVLMHFSQLYKPREVPRILRERCPESLARRIVSFAPDRNAWPG
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgctatggatggaccaggagatgctcaccaaggttcaggcaggcggttactcgatccgc
ggggtctcggtcggcggggtgtacacctcgatgatggtgtccgagctgggcgcgatgttc
gacgtcggcatggcgctgcgctcgttctcgggcgccgatcgcctgtttctcagccacgcg
catatggaccatctgggcgggctgctggcgtttctcggcatgcgcggcgcctacggggtc
gagcgcccgctggaggtgtttctgcccgccgccatcgccgagccggtgcaggcgctgttg
cgcgcggccgagccgctgcagcgctttcccctcaagatcgcgaccgtgccgatggaaccc
ggacaggtggtcgaactgcgccgcgatctcagcgtgcgcgcgctgcgcaccttccatccc
gtgccctcgctgggctatcagttctttcgcagggtgagcaagctgcgcgacgagtttcgc
gacctgcccggcgccgagatcggccgccgccggcgcgcgggcgaggatctgttccgcgag
gagacccacctcgagctggcctacgtcaccgacaccctggtgcgcgtgctcgacaccgag
ccctcgctgctgcgcagcaaagtgctgatcctcgagtgcaccttcctcgaccagcgcaag
agcctggccgactcgcgcgcgggctgtcacatccacctcgacgagctgctcgagcgcgcc
gactcgttcgagaatgaggcgctggtgctcatgcacttcagccagctctacaagccgcgc
gaggtgccgcgcatcctgcgcgagcgctgccccgagtcgctggcgcggcgcatcgtcagc
tttgcgcccgaccgcaacgcgtggcctggctga
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