Haliangium ochraceum: Hoch_3071
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Entry
Hoch_3071 CDS
T01103
Name
(GenBank) PKD domain containing protein
Organism
hoh
Haliangium ochraceum
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CarboxypepD_reg
CarbopepD_reg_2
PKD
CooC_C
Sde0182_C
Motif
Other DBs
NCBI-ProteinID:
ACY15577
UniProt:
D0LR69
LinkDB
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Position
4235489..4238692
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AA seq
1067 aa
AA seq
DB search
MSTTRSIRYLALALLVSVPAGCSTPRDSGDDGDSDGVELADKRGTEASKRGQEVHGTIIA
DLPAIDGSQNGPLVPVPDVRVWVKNVSSGVQSDPVESDLAGRYIIPRQYEGDYLLCWDKD
GWEAACTREPFRLSKTTYFPGLTKIAPERDDGSSDTGVIRGRVQLADETSCWYESEFFAR
EETARVELLNIFGQVVQDIRANDHGDFVLTHVPYSYFQVRSTCGEEVRRAGLSYSGVDMS
GATPIAAQELPNRRPSVHTAVAYADGEGVRHVRAGEIVEVVAEASDPDGDDLRFEWKVQE
GSGELSSSSSDAVGWRLPEAPGLHSLYVVASDDRGGVHQHKITLEVESREVLFSGKVLGS
DGAELAGAVVTVNGRTAEAGQGGAFALSLERSDSYTLHIEAEGYAELGKRVDLALSGNRW
VLTRAHRQTIDPTIENVIIDKRKDWLNPRDDKEYRRRPARVTLPADALVDAEGRRADPAN
GPYSAYIATIDPTGEMMAGDFGARNLDGESPYLVSFGALFIEVRDAAGRTYNLAEGERAL
LESPIQDPLLQEDVPSEIDMWTFDPDSGDWLQDEINARRDGDVYVTELASFSTHNADLQK
TDPACVRVVASPALLALGDLVARIDVATGPSSTRRYAVNIDDQNNVLYNLPDNAPFTLEL
FQGVAPNDVLIHAEPGNTGSPWSATAGAPPYPYSACDATVTLDVPALPPAFLQYSKGTGS
AAQAAGYYAAIDPLDERTTLGDWWAINGFDPSTGAGGVRASFGNDNDLGFGRDMHCLSSG
ADVACFVTNYGQPDQDPGNADQALLADTTQAVATVTMEYSAVPGYSSSDRIVKFYVYQGG
GPSGVRLDSADLDKTGPKFVPNLCLVCHGGNYNPVDPANPSFSEINAGASFREFDTHSFT
YPGASPQADQEDEFYDLNQLVLLSNPAPAIVELVGQFYANGQTVDANAVPADWQAAQTSG
SNLPAGLYLDVVGKSCRTCHVAQPDYNPLALNNSAYPDWNSYSMFRDVRQFSHFLVCDAK
IMPNALVTFKNFWLSLGPHRPERFADFVDPASGWPSSLSNDIGPCAP
NT seq
3204 nt
NT seq
+upstream
nt +downstream
nt
atgtctaccactcgatcaatacgatatctggcgttggcgctgctcgtcagcgtgcccgcg
ggctgtagcacgccgcgcgacagcggcgacgacggcgacagcgacggcgtcgaactcgcc
gacaagcgcggcaccgaggccagcaaacgcggccaggaggtgcacggcaccatcatcgcc
gacctgccggccatagacggctcgcagaacggaccgctcgtacccgtccccgacgtccgc
gtatgggtcaagaacgtgtcgagcggcgtgcagagcgacccggtcgagagcgatctcgcc
ggccgctacatcatcccgcgccagtacgagggcgattacctgctgtgctgggacaaagac
ggctgggaggccgcgtgcacgcgcgagcccttccgcctgagcaagaccacctacttcccc
ggcctcaccaagatcgcgcccgagcgcgacgacggcagcagcgacaccggcgtgatccgc
ggccgcgtgcagctcgccgacgagacctcgtgctggtacgagagcgagtttttcgcgcgc
gaggagaccgcgcgcgtcgagctgctcaacattttcggccaggtggtccaggacatccgc
gccaacgaccacggcgacttcgtgctcacgcacgtgccctacagctacttccaggtgcgc
agcacctgcggcgaggaggtccggcgcgccggcctcagttacagcggcgtggacatgtcc
ggggccacgcccatcgctgcccaggagctgcccaaccgacgcccgtcggtgcacaccgcg
gtggcctacgccgacggcgagggcgtgcgtcacgtgcgcgccggtgagatcgtcgaggtc
gtggccgaggccagcgaccccgacggcgacgatctgcgcttcgagtggaaggtgcaggag
ggctcgggcgagctgagcagctcgagcagcgacgcggtcggctggcggctgcccgaggcg
cccggcctgcacagcctgtacgtggtcgccagcgacgatcgcggcggcgtccaccagcac
aagatcacgctcgaggtcgagtcgcgcgaggtgctgttctcgggcaaggtcctgggcagc
gacggcgccgagctcgcgggcgccgtggtcacggtcaacggcaggacggccgaggccggg
cagggcggcgcgttcgcgctctcgctcgagcgcagcgactcctacaccctgcacatcgag
gccgagggctacgccgagctgggcaagcgcgtggacctcgcgctcagcggcaaccgctgg
gtgctcacccgcgcccaccgccagaccatcgatcccaccatcgagaacgtcatcatcgac
aagcgcaaggactggctcaacccgcgcgacgacaaggagtaccggcgtcgcccggcgcgc
gtgaccctgcccgccgatgccctggtcgacgccgagggtcgccgcgccgatccggccaac
ggcccgtactcggcgtacatcgccaccatcgaccccaccggcgagatgatggccggcgac
tttggcgcgcgcaatctcgacggtgagagcccctacctggtgtcctttggcgccttgttc
atcgaggtgcgcgacgccgccggtcgcacctacaacctggccgagggcgagcgcgcgctg
ctcgagagccccatccaggatccgctgctgcaggaggacgtgccgtccgaaatcgacatg
tggaccttcgacccggacagcggcgactggctgcaggacgagatcaacgcgcgccgcgac
ggcgacgtctacgtgaccgagctggccagcttctccacccacaacgccgacctgcagaag
accgatccggcgtgcgtgcgcgtcgtcgccagcccggcgctgctggcgctcggcgacctg
gtggcgcgcatcgacgtggccaccggccccagcagcacgcgccgctacgcggtcaacatc
gacgaccagaacaacgtgctctacaacctgcccgacaacgctcccttcaccctcgagctg
ttccagggcgtggcgccgaacgacgtgctcatccacgccgagccgggcaacaccggcagc
ccgtggtcggccacagccggcgcgccgccgtatccctactcggcctgcgacgccaccgtg
accctcgacgtgcccgcgctgccgccggcgttcctgcagtacagcaagggcaccggctcc
gcggcccaggccgccggctactatgcggccatcgacccgctggacgagcgcaccacgctc
ggcgactggtgggccatcaacggcttcgacccgagcacgggcgccggcggcgtgcgcgcc
tccttcggcaatgacaacgacctcggctttggccgcgacatgcactgcctgagcagcggc
gccgacgtggcctgctttgtgaccaattacggacagccggaccaagaccccggcaacgcc
gaccaggccctgctcgccgacaccacccaggccgtggccaccgtgaccatggagtactcg
gccgtgcccgggtattcgtcctccgatcgcatcgtcaagttctacgtctaccagggcggc
ggacccagcggcgtgcgtctcgacagcgccgacctcgacaaaaccgggcccaagttcgtg
cccaacctgtgcctggtgtgccacggcggcaactacaaccccgtggatcccgccaacccg
agcttcagcgagatcaacgccggcgccagcttccgcgagttcgacacccactcgttcacc
tatccgggcgcgtcgccgcaagccgaccaggaggacgaattctacgacctcaaccagctc
gtgctgctgagcaacccggcgcccgcgatcgtcgaattggtcggccagttctacgccaat
ggccagaccgttgatgccaacgctgtgcccgcggactggcaggcggcgcagaccagcggc
tcgaacctgcccgcgggtctgtacctggacgtggtcggcaaatcctgccgcacctgccac
gtggcccagcccgactacaacccgctcgcgctcaataacagcgcctaccccgactggaac
agctacagcatgttccgcgatgtccgccagttctcgcacttcctggtgtgcgacgccaag
atcatgcccaacgcgctggtgaccttcaaaaacttctggctcagcctggggccgcatcgg
cccgagcgcttcgccgactttgtcgacccggcgtccggctggccgagctcgttgagcaac
gacatcggcccctgcgcgccctga
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